HHsearch alignment for GI: 254781053 and conserved domain: COG0492
>COG0492 TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones].
Probab=96.69 E-value=0.00034 Score=49.03 Aligned_cols=97 Identities=24% Similarity=0.315 Sum_probs=58.9
Q ss_pred CCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHCCCCC------------CCCC-----CCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 332101234454332013220122011100001112------------2122-----22112222222222222322002
Q gi|254781053|r 175 KNLLVIGAGVIGLELGSVWTRLGSCVKIIEHSGTIL------------NGMD-----KEIAAHCLKIMSKQGMNFQLNSK 237 (466)
Q Consensus 175 ~~ivIIGgG~ig~E~A~~~~~lG~~Vtli~~~~~ll------------~~~d-----~~~~~~~~~~l~~~gV~i~~~~~ 237 (466)
T Consensus 4 ~DviIIGaGPAGl~AAiya~r~~l~~~li~~~~~~gg~~~~~~~venypg~~~~~~g~~L~~~~~~~a~~~~~~~~~-~~ 82 (305)
T COG0492 4 YDVIIIGGGPAGLTAAIYAARAGLKVVLILEGGEPGGQLTKTTDVENYPGFPGGILGPELMEQMKEQAEKFGVEIVE-DE 82 (305)
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEE-EE
T ss_conf 28899895889999999998758985699947875886344333357679867775089999999777634708888-99
Q ss_pred HHHHHCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEE
Q ss_conf 3442014687216999721332110000023204531210
Q gi|254781053|r 238 VSSVKKVKGKAQVVYRSTDDEPINIEADAVLVAAGRRPYT 277 (466)
Q Consensus 238 v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vl~a~G~~Pn~ 277 (466)
T Consensus 83 v~~v~~~~~--~F~v~t~~~---~~~ak~vIiAtG~~~~~ 117 (305)
T COG0492 83 VEKVELEGG--PFKVKTDKG---TYEAKAVIIATGAGARK 117 (305)
T ss_pred EEEEEECCC--EEEEEECCC---EEEEEEEEECCCCCCCC
T ss_conf 899860686--099994797---49865699961776567