HHsearch alignment for GI: 254781053 and conserved domain: COG3634
>COG3634 AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones].
Probab=91.52 E-value=0.3 Score=27.65 Aligned_cols=99 Identities=17% Similarity=0.260 Sum_probs=62.7
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHCCCCHHHHH-H-CCCCCC------------CCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 3332101234454332013220122011100-0-011122------------1222211222222222222232200234
Q gi|254781053|r 174 PKNLLVIGAGVIGLELGSVWTRLGSCVKIIE-H-SGTILN------------GMDKEIAAHCLKIMSKQGMNFQLNSKVS 239 (466)
Q Consensus 174 P~~ivIIGgG~ig~E~A~~~~~lG~~Vtli~-~-~~~ll~------------~~d~~~~~~~~~~l~~~gV~i~~~~~v~ 239 (466)
T Consensus 211 ~yDVLvVGgGPAgaaAAIYaARKGiRTGl~aerfGGQvldT~~IENfIsv~~teGpkl~~ale~Hv~~Y~vDimn~qra~ 290 (520)
T COG3634 211 AYDVLVVGGGPAGAAAAIYAARKGIRTGLVAERFGGQVLDTMGIENFISVPETEGPKLAAALEAHVKQYDVDVMNLQRAS 290 (520)
T ss_pred CCEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHCCEECCCCCHHHEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 83499986886316789999861211100156518820000033330056545466899999998764682455334342
Q ss_pred HHHCCC-CCCEEEEEEECCCCCCCEEEEEEECCCCE
Q ss_conf 420146-87216999721332110000023204531
Q gi|254781053|r 240 SVKKVK-GKAQVVYRSTDDEPINIEADAVLVAAGRR 274 (466)
Q Consensus 240 ~i~~~~-~~~~v~~~~~~g~~~~i~~D~vl~a~G~~ 274 (466)
T Consensus 291 ~l~~a~~~~~l~ev~l~nG--avLkaktvIlstGAr 324 (520)
T COG3634 291 KLEPAAVEGGLIEVELANG--AVLKARTVILATGAR 324 (520)
T ss_pred CCEECCCCCCCEEEEECCC--CEECCCEEEEECCCC
T ss_conf 0201578886079995478--351131699842764