HHsearch alignment for GI: 254781053 and conserved domain: PRK05249
>PRK05249 soluble pyridine nucleotide transhydrogenase; Provisional.
Probab=97.90 E-value=8.4e-05 Score=53.46 Aligned_cols=94 Identities=18% Similarity=0.357 Sum_probs=56.8
Q ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCHHHH
Q ss_conf 19999898668999999998799399993799715025136673709899999999999986675581647753289999
Q gi|254781053|r 4 DVAVVGGGPAGYACAIKAAQLKNKVAIIEKEKTYGGTCLNIGCIPSKALLHASEMYSHIAKEAGDLGINIASCHLDLKKM 83 (466)
Q Consensus 4 DvvIIG~G~AG~~aA~~~~~~G~~V~lIE~~~~~GGtC~~~GCiPsK~l~~~a~~~~~~~~~~~~~g~~~~~~~~d~~~~ 83 (466)
T Consensus 178 ~vvIIGgG~ig~E~A~~~~~lG~~Vtiv~~~~~l---------l~----------------------------~~d~-~- 218 (465)
T PRK05249 178 SLIIYGAGVIGCEYASIFRGLGVKVDLINTRDRL---------LS----------------------------FLDD-E- 218 (465)
T ss_pred EEEEECCCCCHHHHHHHHHHHCCEEEEEECCCCC---------HH----------------------------HCCH-H-
T ss_conf 5999999821799999999609877897216600---------02----------------------------2189-9-
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCEEEEEEE-E-EEC-CCCCCCCCCCCCCCCCCCEEECCCCCCCCC
Q ss_conf 999999999877777876400431011001-1-100-222102357521123221000046766524
Q gi|254781053|r 84 MSYKKSIVESNTQGINFLLKKNKIITYHGS-A-RIV-SNNKILVKGSSSEETIEAKNIVIATGSEAS 147 (466)
Q Consensus 84 ~~~~~~~v~~~~~~~~~~~~~~~V~~~~g~-a-~~~-~~~~v~V~~~~~~~~i~ad~iviATGs~p~ 147 (466)
T Consensus 219 ------~~----~~l~~~l~~~gI~i~~~~~v~~i~~~~~~~~v~~~~g-~~i~~D~Vl~a~Gr~pn 274 (465)
T PRK05249 219 ------IS----DALSYHFRNSGVVIRHNEEYEKVEGGDDGVILHLKSG-KKIKADCLLYANGRTGN 274 (465)
T ss_pred ------HH----HHHHHHHHHCCCEEEECCEEEEEEEECCEEEEEECCC-CEEEEEEEEECCCCCCC
T ss_conf ------99----9999999987929997988999996087679994799-59987089988766667