HHsearch alignment for GI: 254781053 and conserved domain: PRK06996
>PRK06996 hypothetical protein; Provisional.
Probab=97.08 E-value=9.6e-05 Score=53.04 Aligned_cols=136 Identities=21% Similarity=0.285 Sum_probs=66.3
Q ss_pred CCEEEECCCHHHHHHHHHHHHC----CCCEEEEECCCCCC------EEEEEECCCCHHHHHHHHHHHHHHHH--------
Q ss_conf 3199998986689999999987----99399993799715------02513667370989999999999998--------
Q gi|254781053|r 3 YDVAVVGGGPAGYACAIKAAQL----KNKVAIIEKEKTYG------GTCLNIGCIPSKALLHASEMYSHIAK-------- 64 (466)
Q Consensus 3 YDvvIIG~G~AG~~aA~~~~~~----G~~V~lIE~~~~~G------GtC~~~GCiPsK~l~~~a~~~~~~~~-------- 64 (466)
T Consensus 12 ~DV~IvGaGpvGl~lA~~Lar~~~~~~~~v~lie~~~~~~~~~d~Ra~al~~---~s~~~L~~lG~w~~~~~~i~~~~v~ 88 (397)
T PRK06996 12 YDIAIVGAGPVGLALAGWLARRSATRPLSIALIDAREPAASANDPRAIALSH---GSRVLLETLGAWPADATPIEHIHVS 88 (397)
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEEEECH---HHHHHHHHCCCCCCCCCCEEEEEEE
T ss_conf 8889999279999999999601687896699976898666789993999757---8999999879984568742599994
Q ss_pred HHHHCCE-ECCCCCCCHHH---HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEE--E-CCCC--CCCCCCCCCCCCCCC
Q ss_conf 6675581-64775328999---999999999987777787640043101100111--0-0222--102357521123221
Q gi|254781053|r 65 EAGDLGI-NIASCHLDLKK---MMSYKKSIVESNTQGINFLLKKNKIITYHGSAR--I-VSNN--KILVKGSSSEETIEA 135 (466)
Q Consensus 65 ~~~~~g~-~~~~~~~d~~~---~~~~~~~~v~~~~~~~~~~~~~~~V~~~~g~a~--~-~~~~--~v~V~~~~~~~~i~a 135 (466)
T Consensus 89 ~~~~~g~~~~~~~~~~~~~lg~iv~~-~----~l~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~a 163 (397)
T PRK06996 89 QRGHFGRTLIDRDDHDVPALGYVVRY-G----SLVAALARAVRGTGVTWLTSTTARAPAQDADGVTLALDTPQGARTLRA 163 (397)
T ss_pred ECCCCCCEECCHHHCCCCCCCCCCCH-H----HHHHHHHHHHHHCCCEEEECCCEEEEEECCCCEEEEECCCCCCEEEEE
T ss_conf 05776621126544288522354437-9----999999999974898798344514577636745899605998659981
Q ss_pred EEECCCCCCCC
Q ss_conf 00004676652
Q gi|254781053|r 136 KNIVIATGSEA 146 (466)
Q Consensus 136 d~iviATGs~p 146 (466)
T Consensus 164 ~llVgaDG~~S 174 (397)
T PRK06996 164 RIAVQAEGGLF 174 (397)
T ss_pred CEEEECCCCCH
T ss_conf 89999599981