HHsearch alignment for GI: 254781053 and conserved domain: PRK09853

Probab=97.82  E-value=2.5e-06  Score=64.61  Aligned_cols=85  Identities=25%  Similarity=0.403  Sum_probs=59.9

Q ss_pred             CCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHCCCCCC-------C--CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC
Q ss_conf             3321012344543320132201220111000011122-------1--222211222222222222232200234420146
Q gi|254781053|r  175 KNLLVIGAGVIGLELGSVWTRLGSCVKIIEHSGTILN-------G--MDKEIAAHCLKIMSKQGMNFQLNSKVSSVKKVK  245 (466)
Q Consensus       175 ~~ivIIGgG~ig~E~A~~~~~lG~~Vtli~~~~~ll~-------~--~d~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~  245 (466)
T Consensus       551 KKVAVIGsGPAGLaAA~~Lar~Gh~VTVFEk~~~~GGmL~yGIP~fRLPk~vIdreI~~l~~~GV~f~tnvg-----~-d  624 (1032)
T PRK09853        551 HPVAVIGAGPAGLAAGYFLARAGHPVTVFEREENAGGVVKNIIPEFRIPAELIQHDIDFVAAHGVKFEYGCS-----P-D  624 (1032)
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCC-----C-C
T ss_conf             979998968899999999997799369981589788426735887678999999999999977969996999-----9-8


Q ss_pred             CCCEEEEEEECCCCCCCE-EEEEEECCCCE
Q ss_conf             872169997213321100-00023204531
Q gi|254781053|r  246 GKAQVVYRSTDDEPINIE-ADAVLVAAGRR  274 (466)
Q Consensus       246 ~~~~v~~~~~~g~~~~i~-~D~vl~a~G~~  274 (466)
T Consensus       625 ----itl-----e~L~~eGyDAVfLa~GA~  645 (1032)
T PRK09853        625 ----LTV-----EQLKNQGYHYVLLAIGAD  645 (1032)
T ss_pred             ----CCH-----HHHHHCCCCEEEEECCCC
T ss_conf             ----889-----999657999999945889