HHsearch alignment for GI: 254781053 and conserved domain: PRK12779

>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional.
Probab=99.95  E-value=6.5e-28  Score=221.70  Aligned_cols=278  Identities=24%  Similarity=0.308  Sum_probs=186.4

Q ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCHHHH
Q ss_conf             19999898668999999998799399993799715025136673709899999999999986675581647753289999
Q gi|254781053|r    4 DVAVVGGGPAGYACAIKAAQLKNKVAIIEKEKTYGGTCLNIGCIPSKALLHASEMYSHIAKEAGDLGINIASCHLDLKKM   83 (466)
Q Consensus         4 DvvIIG~G~AG~~aA~~~~~~G~~V~lIE~~~~~GGtC~~~GCiPsK~l~~~a~~~~~~~~~~~~~g~~~~~~~~d~~~~   83 (466)
T Consensus       308 kVAVIGsGPAGLs~A~~Lar~Gy~VTVFEalh~~GGvL~-YG-IPe--------------------------FRLP-K~I  358 (944)
T PRK12779        308 PIAVVGSGPSGLINAYLLAVEGFPVTIFEAFHDLGGVLR-YG-IPE--------------------------FRLP-NQL  358 (944)
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEE-EC-CCC--------------------------CCCC-HHH
T ss_conf             679988576899999999977993399944787885589-55-876--------------------------6687-899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCC-CC--CCCCCCCCCCCEE
Q ss_conf             99999999987777787640043101100111002221023575211232210000467665-24--4457665321002
Q gi|254781053|r   84 MSYKKSIVESNTQGINFLLKKNKIITYHGSARIVSNNKILVKGSSSEETIEAKNIVIATGSE-AS--GLPGMSIDFDEQV  160 (466)
Q Consensus        84 ~~~~~~~v~~~~~~~~~~~~~~~V~~~~g~a~~~~~~~v~V~~~~~~~~i~ad~iviATGs~-p~--~iP~~~~~~~~~~  160 (466)
T Consensus       359 -------V~~EI----~~l~~lGV~f~~n~~--V-Gk~~tl~eL---~~eGydAVfIg~GAg~p~~l~IpGE~L----~G  417 (944)
T PRK12779        359 -------IDDVV----EKIKLLGGRFVKNFV--V-GKTATLEDL---KAEGFWKIFVGTGAGLPTFMNVPGEHL----LG  417 (944)
T ss_pred             -------HHHHH----HHHHHCCEEEEECCE--E-CCCCCHHHH---HHCCCCEEEEEECCCCCCCCCCCCCCC----CC
T ss_conf             -------99999----999967839997856--4-776889999---768999899974788875689888777----68


Q ss_pred             EEEECCCCC---C-------------CCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHCCC-CCCCCCCCCCCCCCC
Q ss_conf             453057411---1-------------11133321012344543320132201220111000011-122122221122222
Q gi|254781053|r  161 IVSSTGALS---F-------------SSVPKNLLVIGAGVIGLELGSVWTRLGSCVKIIEHSGT-ILNGMDKEIAAHCLK  223 (466)
Q Consensus       161 ~~t~~~~~~---l-------------~~~P~~ivIIGgG~ig~E~A~~~~~lG~~Vtli~~~~~-ll~~~d~~~~~~~~~  223 (466)
T Consensus       418 V~sA~EfLtrvNlm~a~~~~~~tP~~~~~GK~VvVIGGGNtAMDaARTA~RlGA~VtiVYRRt~~EMPAr~EE----i-~  492 (944)
T PRK12779        418 VMSANEFLTRVNLMRGLDDRYETPLPEVKGKNVFVIGGGNTAMDAARTAKRLGGNVTIVYRRTKSEMPARVEE----L-H  492 (944)
T ss_pred             EEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCHHHCCCCHHH----H-H
T ss_conf             2568999998643123566456864267898799989956699999998852987899984587658988999----9-8


Q ss_pred             CCCCCCCCCCCCHHHHHHHCCCCCCEE---EE---EEE------------CCCCCCCEEEEEEECCCCEEEECCCCCEE-
Q ss_conf             222222223220023442014687216---99---972------------13321100000232045312103678400-
Q gi|254781053|r  224 IMSKQGMNFQLNSKVSSVKKVKGKAQV---VY---RST------------DDEPINIEADAVLVAAGRRPYTKGLGLEE-  284 (466)
Q Consensus       224 ~l~~~gV~i~~~~~v~~i~~~~~~~~v---~~---~~~------------~g~~~~i~~D~vl~a~G~~Pn~~~l~Le~-  284 (466)
T Consensus       493 hA~EEGV~F~~L~~P~e~iGde~g~~v~~~~~~~MeLGEPDaSGRRrPvp~g~~e~i~~D~VI~AiG~~pNpl-i-~~t~  570 (944)
T PRK12779        493 HALEEGINLAVLRAPREFIGDDHTHFVTHALLDVNELGEPDKSGRRSPKPTGEIERVPVDLVIMALGNTANPI-M-KDAE  570 (944)
T ss_pred             HHHHCCCEEEEECCCHHHEECCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCEEEECCCCCCCCC-C-CCCC
T ss_conf             8985792899814966552446897788999998535898877897887779716977799999057899951-0-1368


Q ss_pred             EECCCCCCCCCCCCC-CCEEECCCCEEECCCCCCCCCCCEECCCCCCEEECCCCC
Q ss_conf             001267642233377-633302684870243335434430001232012011122
Q gi|254781053|r  285 IGINIDHRGCIEIGG-QFQTSISTIYAIGDVVRGPMLAHKAEDEGIAVAEIISGQ  338 (466)
Q Consensus       285 ~gi~~~~~G~I~vd~-~~~Ts~p~IyA~GDv~g~~~l~~~A~~~g~~aa~~i~~~  338 (466)
T Consensus       571 p~L~~~k~G~I~vd~~t~~Ts~~gVfAGGD~vrG~aTVIlAmgdG~~AAkei~~~  625 (944)
T PRK12779        571 PGLKTNKWGTIEVEAGSQRTSIKDVYSGGDAARGGSTAIRAAGDGQAAAKEIVGE  625 (944)
T ss_pred             CCCCCCCCCEEEECCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf             7730167851998855576677777633550245678988755459999998546