HHsearch alignment for GI: 254781053 and conserved domain: PRK12779
>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional.
Probab=97.38 E-value=1.3e-05 Score=59.41 Aligned_cols=90 Identities=18% Similarity=0.176 Sum_probs=63.2
Q ss_pred CCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHCCCCC-------CC--CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC
Q ss_conf 332101234454332013220122011100001112-------21--222211222222222222232200234420146
Q gi|254781053|r 175 KNLLVIGAGVIGLELGSVWTRLGSCVKIIEHSGTIL-------NG--MDKEIAAHCLKIMSKQGMNFQLNSKVSSVKKVK 245 (466)
Q Consensus 175 ~~ivIIGgG~ig~E~A~~~~~lG~~Vtli~~~~~ll-------~~--~d~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~ 245 (466)
T Consensus 307 ~kVAVIGsGPAGLs~A~~Lar~Gy~VTVFEalh~~GGvL~YGIPeFRLPK~IV~~EI~~l~~lGV~f~~n~~VGk~~tl~ 386 (944)
T PRK12779 307 PPIAVVGSGPSGLINAYLLAVEGFPVTIFEAFHDLGGVLRYGIPEFRLPNQLIDDVVEKIKLLGGRFVKNFVVGKTATLE 386 (944)
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEECCEECCCCCHH
T ss_conf 86799885768999999999779933999447878855895587666878999999999996783999785647768899
Q ss_pred CCCEEEEEEECCCCCCCEEEEEEECCCC-EEE
Q ss_conf 8721699972133211000002320453-121
Q gi|254781053|r 246 GKAQVVYRSTDDEPINIEADAVLVAAGR-RPY 276 (466)
Q Consensus 246 ~~~~v~~~~~~g~~~~i~~D~vl~a~G~-~Pn 276 (466)
T Consensus 387 ------------eL~~eGydAVfIg~GAg~p~ 406 (944)
T PRK12779 387 ------------DLKAEGFWKIFVGTGAGLPT 406 (944)
T ss_pred ------------HHHHCCCCEEEEEECCCCCC
T ss_conf ------------99768999899974788875