HHsearch alignment for GI: 254781053 and conserved domain: TIGR01316
>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric; InterPro: IPR006004 One pathway for the assimilation of ammonia and glutamate biosynthesis involves homotetrameric glutamate synthase (1.4.1.13 from EC) which transfers the amide group of glutamine to 2-oxoglutarate to yield two molecules of glutamate . 2 L-glutamate + NADP^+ = L-glutamine + 2-oxoglutarate + NADPH + H^+. .
Probab=97.60 E-value=9.8e-06 Score=60.24 Aligned_cols=88 Identities=28% Similarity=0.363 Sum_probs=66.1
Q ss_pred CCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHCCCC-------CC--CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC
Q ss_conf 33210123445433201322012201110000111-------22--1222211222222222222232200234420146
Q gi|254781053|r 175 KNLLVIGAGVIGLELGSVWTRLGSCVKIIEHSGTI-------LN--GMDKEIAAHCLKIMSKQGMNFQLNSKVSSVKKVK 245 (466)
Q Consensus 175 ~~ivIIGgG~ig~E~A~~~~~lG~~Vtli~~~~~l-------l~--~~d~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~ 245 (466)
T Consensus 143 ~kVAViGaGPAGL~cA~elAk~Gh~VtvfEALhKPGGV~~YGIPefRLpKei~~~E~k~LkklGv~fr~~~lvGk----- 217 (462)
T TIGR01316 143 KKVAVIGAGPAGLACASELAKKGHEVTVFEALHKPGGVLAYGIPEFRLPKEIVETEVKKLKKLGVKFRTDYLVGK----- 217 (462)
T ss_pred CEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEECCEECC-----
T ss_conf 779998468214688999974798699997148998567536888548757889888876326637994437505-----
Q ss_pred CCCEEEEEEECCCCCCCEEEEEEECCCC
Q ss_conf 8721699972133211000002320453
Q gi|254781053|r 246 GKAQVVYRSTDDEPINIEADAVLVAAGR 273 (466)
Q Consensus 246 ~~~~v~~~~~~g~~~~i~~D~vl~a~G~ 273 (466)
T Consensus 218 ---t~TL~e---L~~~YGfDAVFIgtGA 239 (462)
T TIGR01316 218 ---TVTLEE---LLEKYGFDAVFIGTGA 239 (462)
T ss_pred ---CHHHHH---HHHHCCCCEEEEEECC
T ss_conf ---112888---8875197079995068