HHsearch alignment for GI: 254781053 and conserved domain: TIGR02352
>TIGR02352 thiamin_ThiO glycine oxidase ThiO; InterPro: IPR012727 This family consists of the homotetrameric, FAD-dependent glycine oxidase ThiO, from species such as Bacillus subtilis that use glycine in thiamine biosynthesis. In general, members of this family will not be found in species such as Escherichia coli that instead use tyrosine and the ThiH protein .; GO: 0016491 oxidoreductase activity, 0050660 FAD binding.
Probab=98.33 E-value=2.2e-06 Score=65.03 Aligned_cols=203 Identities=22% Similarity=0.269 Sum_probs=96.5
Q ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEE-CCCCCCCHHHH
Q ss_conf 99998986689999999987993999937997150251366737098999999999999866755816-47753289999
Q gi|254781053|r 5 VAVVGGGPAGYACAIKAAQLKNKVAIIEKEKTYGGTCLNIGCIPSKALLHASEMYSHIAKEAGDLGIN-IASCHLDLKKM 83 (466)
Q Consensus 5 vvIIG~G~AG~~aA~~~~~~G~~V~lIE~~~~~GGtC~~~GCiPsK~l~~~a~~~~~~~~~~~~~g~~-~~~~~~d~~~~ 83 (466)
T Consensus 1 ~~ViGGGvIGL~~A~~L~~~G~~V~l~~~~~~~g~----------~AS~~AaGMLAP~aE------~~~~~~~~f~L~-- 62 (357)
T TIGR02352 1 VLVIGGGVIGLSVAVELAERGHSVTLLDRDPTVGG----------GASWAAAGMLAPVAE------VEYAEDPLFDLA-- 62 (357)
T ss_pred CEEECCHHHHHHHHHHHHHCCCCEEEEECCCCHHH----------HHHHHHHHHHHHHCC------CCCCCCHHHHHH--
T ss_conf 97845318789999999974993899965860456----------778866433243266------746767478999--
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCC-CCCC-CEEECCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 99999999987777787640043101100111002221023575211-2322-100004676652444576653210024
Q gi|254781053|r 84 MSYKKSIVESNTQGINFLLKKNKIITYHGSARIVSNNKILVKGSSSE-ETIE-AKNIVIATGSEASGLPGMSIDFDEQVI 161 (466)
Q Consensus 84 ~~~~~~~v~~~~~~~~~~~~~~~V~~~~g~a~~~~~~~v~V~~~~~~-~~i~-ad~iviATGs~p~~iP~~~~~~~~~~~ 161 (466)
T Consensus 63 ----~~S~~~yp~~~~~l~~~tg~~~~y-----~~~G~l~vA~~~~d~~~l~~~~~~~~~~G~-------------~~~~ 120 (357)
T TIGR02352 63 ----LESLRLYPEWLEALKELTGLDTGY-----RQCGTLVVAFDEDDVEKLRQLADLQSATGM-------------ELEW 120 (357)
T ss_pred ----HHHHHHHHHHHHHHHHCCCCCCEE-----ECCCEEEEECCCCHHHHHHHHHHHHHHHCC-------------EEEE
T ss_conf ----999997599999987317995127-----405258940787116888999999875286-------------0465
Q ss_pred EEECCCCCCCCCCC-CCCCCCCCCCCCCCCHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 53057411111133-32101234454332013220122011100001112212222112222222222222322002344
Q gi|254781053|r 162 VSSTGALSFSSVPK-NLLVIGAGVIGLELGSVWTRLGSCVKIIEHSGTILNGMDKEIAAHCLKIMSKQGMNFQLNSKVSS 240 (466)
Q Consensus 162 ~t~~~~~~l~~~P~-~ivIIGgG~ig~E~A~~~~~lG~~Vtli~~~~~ll~~~d~~~~~~~~~~l~~~gV~i~~~~~v~~ 240 (466)
T Consensus 121 l~~~~~r~~E--P~L~~~~~~a~~~-----------p~d~~v~----------~r~l~~AL~~~~~~lGv~i~~~~~v~~ 177 (357)
T TIGR02352 121 LSGRALRRLE--PYLSPGIRGAVYY-----------PDDAHVD----------PRELLKALVKALEKLGVEIIEEVEVQE 177 (357)
T ss_pred CCHHHHHHHC--CCCCCCCCEEEEC-----------CCCCCCC----------CHHHHHHHHHHHHHCCCEEEECCCEEE
T ss_conf 0779999844--2524220334574-----------8652337----------189999999999856947986253356
Q ss_pred HHCCCCCCEEEEEEECCCCCCCEEEEEEECCCCE
Q ss_conf 2014687216999721332110000023204531
Q gi|254781053|r 241 VKKVKGKAQVVYRSTDDEPINIEADAVLVAAGRR 274 (466)
Q Consensus 241 i~~~~~~~~v~~~~~~g~~~~i~~D~vl~a~G~~ 274 (466)
T Consensus 178 ~~~~~~~~~~~~--~--~~~~~~ad~vV~A~G~w 207 (357)
T TIGR02352 178 IEARGEKVTAVV--T--SSGDVQADQVVLAAGAW 207 (357)
T ss_pred EECCCCEEEEEC--C--CCCCEECCEEEEECCCC
T ss_conf 432676698852--8--85426557479935733