HHsearch alignment for GI: 254781053 and conserved domain: TIGR02731

>TIGR02731 phytoene_desat phytoene desaturase; InterPro: IPR014102 Plants and cyanobacteria (and, supposedly, Chlorobium tepidum) have a conserved pathway from two molecules geranylgeranyl-PP to one of all-trans-lycopene. Members of this family are the enzyme phytoene desaturase (also called phytoene dehydrogenase). This HMM does not include plant chloroplast transit peptides and the entry does not contain zeta-carotene desaturase, which is a closely related family in the same pathway..

Probab=96.18  E-value=0.0073  Score=39.33  Aligned_cols=40  Identities=30%  Similarity=0.490  Sum_probs=36.3

Q ss_pred             EEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEE
Q ss_conf             9999898668999999998799399993799715025136
Q gi|254781053|r    5 VAVVGGGPAGYACAIKAAQLKNKVAIIEKEKTYGGTCLNI   44 (466)
Q Consensus         5 vvIIG~G~AG~~aA~~~~~~G~~V~lIE~~~~~GGtC~~~   44 (466)
T Consensus         2 v~~aGaGlaGl~~akyl~daGh~Pi~~e~~~vlGG~vaaW   41 (454)
T TIGR02731         2 VAIAGAGLAGLSCAKYLADAGHTPIVLEARDVLGGKVAAW   41 (454)
T ss_pred             EEEECCCHHHHHHHHHHHHCCCCCEEEECHHHCCCCEEEE
T ss_conf             5772274556778878763589626863210035502332