>TIGR03169 Nterm_to_SelD pyridine nucleotide-disulfide oxidoreductase family protein. Members of this protein family include N-terminal sequence regions of (probable) bifunctional proteins whose C-terminal sequences are SelD, or selenide,water dikinase, the selenium donor protein necessary for selenium incorporation into protein (as selenocysteine), tRNA (as 2-selenouridine), or both. However, some members of this family occur in species that do not show selenium incorporation, and the function of this protein family is unknown.

Probab=97.67 E-value=5.9e-06 Score=61.85 Aligned_cols=97 Identities=20% Similarity=0.328 Sum_probs=66.4 Q ss_pred CCCCCCCCCCCCCCCHHHHHC---CCCHHHHHHCCCCC-----CC-----CC-CCCCCCCCCCCCCCCCCCCCCHHHHHH Q ss_conf 321012344543320132201---22011100001112-----21-----22-221122222222222223220023442 Q gi|254781053|r 176 NLLVIGAGVIGLELGSVWTRL---GSCVKIIEHSGTIL-----NG-----MD-KEIAAHCLKIMSKQGMNFQLNSKVSSV 241 (466) Q Consensus 176 ~ivIIGgG~ig~E~A~~~~~l---G~~Vtli~~~~~ll-----~~-----~d-~~~~~~~~~~l~~~gV~i~~~~~v~~i 241 (466) T Consensus 1 hiVIvGgG~aG~~~a~~L~~~~~~~~~ItLId~~~~~~y~~~lp~~~~g~~~~~~i~~~~~~~~~~~gv~~i~~-~V~~I 79 (364) T TIGR03169 1 HLVLIGGGHTHALVLRRWAMKPLPGVRVTLINPSSTTPYSGMLPGMIAGHYSLDEIRIDLRRLARQAGARFVIA-EATGI 79 (364) T ss_pred CEEEECCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEECCHHHHHHHCCCCHHHEECCHHHHHHHCCCEEEEE-EEEEE T ss_conf 99999960999999999704178998399999988651625169997404779992216899997779499963-78999 Q ss_pred HCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEECC Q ss_conf 01468721699972133211000002320453121036 Q gi|254781053|r 242 KKVKGKAQVVYRSTDDEPINIEADAVLVAAGRRPYTKG 279 (466) Q Consensus 242 ~~~~~~~~v~~~~~~g~~~~i~~D~vl~a~G~~Pn~~~ 279 (466) T Consensus 80 D~~~k--~V~~~--~g--~~l~YD~LViAtGs~~~~~~ 111 (364) T TIGR03169 80 DPDRR--KVLLA--NR--PPLSYDVLSLDVGSTTPLSG 111 (364) T ss_pred ECCCC--EEEEC--CC--CEEECCEEEEECCCCCCCCC T ss_conf 76889--89988--99--88736889994367778899

HHsearch alignment for GI: 254781053 and conserved domain: TIGR03169