HHsearch alignment for GI: 254781053 and conserved domain: pfam03486
>pfam03486 HI0933_like HI0933-like protein.
Probab=99.25 E-value=2.2e-10 Score=94.07 Aligned_cols=136 Identities=27% Similarity=0.407 Sum_probs=77.1
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCC--------EEEEEECCCCHHHHHH----HHHHHH---------H
Q ss_conf 319999898668999999998799399993799715--------0251366737098999----999999---------9
Q gi|254781053|r 3 YDVAVVGGGPAGYACAIKAAQLKNKVAIIEKEKTYG--------GTCLNIGCIPSKALLH----ASEMYS---------H 61 (466)
Q Consensus 3 YDvvIIG~G~AG~~aA~~~~~~G~~V~lIE~~~~~G--------GtC~~~GCiPsK~l~~----~a~~~~---------~ 61 (466)
T Consensus 1 yDv~VIGgGaaGl~aAi~aa~~g~~V~ilEk~~~~GkKll~tG~GRCN~TN~~~~~~~~~~~~~~~~fl~~~l~~F~~~d 80 (405)
T pfam03486 1 YDVIVIGGGAAGLMAAISAAKRGRRVLLIEKGKKLGRKILISGGGRCNVTNSVEPDNFLSRYPGNPHFLKSALSRFTPWD 80 (405)
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCCCEECCCCCHHHHHHHCCCCHHHHHHHHHHCCHHH
T ss_conf 97999996699999999998689959999589987501588268961407899979998625775799999998489999
Q ss_pred HHHHHHHCCEECCCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEE--EEC-CCC-CCCCCCCCCCCCCC
Q ss_conf 998667558164775---32899999999999998777778764004310110011--100-222-10235752112322
Q gi|254781053|r 62 IAKEAGDLGINIASC---HLDLKKMMSYKKSIVESNTQGINFLLKKNKIITYHGSA--RIV-SNN-KILVKGSSSEETIE 134 (466)
Q Consensus 62 ~~~~~~~~g~~~~~~---~~d~~~~~~~~~~~v~~~~~~~~~~~~~~~V~~~~g~a--~~~-~~~-~v~V~~~~~~~~i~ 134 (466)
T Consensus 81 ~~~ff~~~Gl~~~~e~~Grv-fP~s-~~A~~Vl~~L----~~~l~~~gV~i~~~~~V~~I~~~~~~~~~v~~--~~~~~~ 152 (405)
T pfam03486 81 FIAWFEELGVPLKEEDHGRL-FPVS-DKASDIVDAL----LNELKELGVKIRTRTRVLSVEKDDDGRFRVDT--GGEELE 152 (405)
T ss_pred HHHHHHHCCCEEEECCCCEE-ECCC-CCHHHHHHHH----HHHHHHCCCEEEECCEEEEEEECCCCEEEEEE--CCCEEE
T ss_conf 99999977990597789979-7898-9869999999----99999779789958887899975994599994--895897
Q ss_pred CEEECCCCCCCC
Q ss_conf 100004676652
Q gi|254781053|r 135 AKNIVIATGSEA 146 (466)
Q Consensus 135 ad~iviATGs~p 146 (466)
T Consensus 153 a~~vIlAtGG~s 164 (405)
T pfam03486 153 ADSLVLATGGLS 164 (405)
T ss_pred ECEEEEECCCCC
T ss_conf 278999048866