RPSBLAST alignment for GI: 254781053 and conserved domain: TIGR03143

>gnl|CDD|132187 TIGR03143, AhpF_homolog, putative alkyl hydroperoxide reductase F subunit. This family of thioredoxin reductase homologs is found adjacent to alkylhydroperoxide reductase C subunit predominantly in cases where there is only one C subunit in the genome and that genome is lacking the F subunit partner (also a thioredcxin reductase homolog) that is usually found (TIGR03140). Length = 555

 Score = 54.0 bits (130), Expect = 8e-08
 Identities = 67/332 (20%), Positives = 124/332 (37%), Gaps = 72/332 (21%)

Query: 2   VYDVAVVGGGPAGYACAIKAAQLKNKVAIIEKEKTYGGTCLNIGCIPSKALLHAS--EMY 59
           +YD+ ++GGGPAG +  I A + K    IIEK+   G   +    +    +L+ +  E+ 
Sbjct: 4   IYDLIIIGGGPAGLSAGIYAGRAKLDTLIIEKDDFGGQITITSEVVNYPGILNTTGPELM 63

Query: 60  SHIAKEAGDLGINIASCHLDLKKMMSYKKSIVESNTQGINFLLKKNKIITYHGSARIVSN 119
             + ++A D G+                   +++    ++F      I T          
Sbjct: 64  QEMRQQAQDFGVK-----------------FLQAEVLDVDF---DGDIKTIK-------- 95

Query: 120 NKILVKGSSSEETIEAKNIVIATGSEAS--GLPGMSIDFDEQVIVSSTGALSFSSVPKNL 177
                   ++    +   ++IATG+     G PG        V   +T    F +   ++
Sbjct: 96  --------TARGDYKTLAVLIATGASPRKLGFPGEEEFTGRGVAYCATCDGEFFT-GMDV 146

Query: 178 LVIGAGVIGLELGSVWTRLGSCVKIIEHSGTILNGMDKEIAAHCLKIMSKQGMNFQLNSK 237
            VIG G    E     TR  S V +I           +E    C K+++++  N   + K
Sbjct: 147 FVIGGGFAAAEEAVFLTRYASKVTVIV----------REPDFTCAKLIAEKVKN---HPK 193

Query: 238 V-----SSVKKVKGKAQVVY----------RSTDDEPINIEADAVLVAAGRRPYTKGLGL 282
           +     + +K+  G   + Y           +    P +     V V  G  P ++   L
Sbjct: 194 IEVKFNTELKEATGDDGLRYAKFVNNVTGEITEYKAPKDAGTFGVFVFVGYAPSSE---L 250

Query: 283 EEIGINIDHRGCIEIGGQFQTSISTIYAIGDV 314
            +  + +D RG I      +T++  +YA GD+
Sbjct: 251 FKGVVELDKRGYIPTNEDMETNVPGVYAAGDL 282