HHsearch alignment for GI: 254781054 and conserved domain: TIGR00511

>TIGR00511 aIF-2BII_fam translation initiation factor, putative, aIF-2BII family; InterPro: IPR005250 The delineation of this family is based in part on a discussion and neighbour-joining phylogenetic study , , of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. The archaeal proteins are related to the common ancestor of eIF-2B alpha, beta, and delta rather then specifically to any one of them, and that designation of particular archaeal members as corresponding to eIF-2B alpha or eIF-2B delta is imprecise. It has been suggested that designating the archaeal proteins as translation initiation factors remains unproven. So far, members of this family are found only in the euryarchaeota..
Probab=93.07  E-value=0.67  Score=26.39  Aligned_cols=121  Identities=23%  Similarity=0.242  Sum_probs=83.2

Q ss_pred             HHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECH-------HHHHHHHHHCCCCCCCCCC----
Q ss_conf             99999999998389978998879178999999999987328704896188-------9999998731578655100----
Q gi|254781054|r    6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSS-------RNTENFCKIHHIPLHSPED----   74 (231)
Q Consensus         6 ~K~~~a~~A~~~v~~gmviGlGtGSTv~~~i~~L~~~~~~~~~i~~v~tS-------~~t~~~a~~~gi~~~~l~~----   74 (231)
T Consensus       102 A~~~IG~~G~~RIKDG~T~lTHCNS~AA~S--VIK~A~~~GK~~~V~~TE~RPR~QG~LT~K~L~~~GI~VTLIVDSAVR  179 (303)
T TIGR00511       102 AIRKIGKIGEKRIKDGDTVLTHCNSEAALS--VIKKAYDEGKDVKVIATESRPRNQGYLTVKTLRDAGIDVTLIVDSAVR  179 (303)
T ss_pred             HHHHHHHHCCCCCCCCCEEEEECCHHHHHH--HHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHCCCEEEEEEECHHE
T ss_conf             998864421121247871553005067999--998775368748999706898634025466786659448998501010


Q ss_pred             --CCEEEEEECCHHCCCCCCEEEECCCHHHHHHHHHHHHHCC-EEEEEEHHHCCC-CC-CC
Q ss_conf             --8800798633000476605883165777778799861022-699962303513-45-57
Q gi|254781054|r   75 --VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASR-FIVIGDESKRVD-FL-GR  130 (231)
Q Consensus        75 --~~~iDi~iDGaDevd~~l~lIKGgGgAl~rEKiva~~a~~-~I~i~D~sK~v~-~L-g~  130 (231)
T Consensus       180 YFI~E~D~VVVGAD~ITANG~L~NKIGTSQIA--L~A~E~RVPFl~AAETYKF~PKT~~GE  238 (303)
T TIGR00511       180 YFIKEVDIVVVGADAITANGALVNKIGTSQIA--LIAKEARVPFLVAAETYKFSPKTLVGE  238 (303)
T ss_pred             EEEEEEEEEEECCCCHHHCCCEEECCCHHHHH--HHHHCCCCCHHHHHHHCCCCCCEEEEE
T ss_conf             01125658998785011254100000056899--976116874101101014688505643