HHsearch alignment for GI: 254781054 and conserved domain: pfam00455
>pfam00455 DeoR Bacterial regulatory proteins, deoR family.
Probab=99.08 E-value=2e-09 Score=79.34 Aligned_cols=117 Identities=23% Similarity=0.194 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHC-CCCCCCCC----------
Q ss_conf 9999999999983899789988791789999999999873287048961889999998731-57865510----------
Q gi|254781054|r 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH-HIPLHSPE---------- 73 (231)
Q Consensus 5 ~~K~~~a~~A~~~v~~gmviGlGtGSTv~~~i~~L~~~~~~~~~i~~v~tS~~t~~~a~~~-gi~~~~l~---------- 73 (231)
T Consensus 2 aeK~~Ia~~Aa~~I~~g~~Ifld~GTT~~~la~~L~~----~~~ltVvTnsl~ia~~L~~~~~~~v~llGG~~~~~~~~~ 77 (157)
T pfam00455 2 AEKRRIAKKAASLIEDGDTIFLDAGTTVEELARALLG----HINLTVITNSLPIANALSEKEHFRLILIGGEYRRKTGSF 77 (157)
T ss_pred HHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHC----CCCEEEEECCHHHHHHHHHCCCCEEEEECCCCCCCCCEE
T ss_conf 7899999999986899999999096899999999853----898799989899999998589967998689224788738
Q ss_pred -------C--CCEEEEEECCHHCCCCCCE-EEECCCHHHHHHHHHHHHHCCEEEEEEHHHCCC
Q ss_conf -------0--8800798633000476605-883165777778799861022699962303513
Q gi|254781054|r 74 -------D--VSSVDLSIDGFDEIDSRLR-LIKGYGGALLREKIIAHAASRFIVIGDESKRVD 126 (231)
Q Consensus 74 -------~--~~~iDi~iDGaDevd~~l~-lIKGgGgAl~rEKiva~~a~~~I~i~D~sK~v~ 126 (231)
T Consensus 78 ~G~~a~~~l~~~~~D~afig~~gi~~~~G~~~~~~~~a~~k~~~~-~~s~~~ill~D~sKf~~ 139 (157)
T pfam00455 78 VGPLAESFLSKFRFDKAFFSADGIDLDGGLTTSNLLEASVKRAML-EVAREVILLADHSKFGK 139 (157)
T ss_pred ECHHHHHHHHHCCCCEEEEECCEECCCCCCCCCCHHHHHHHHHHH-HCCCCEEEEECHHHCCC
T ss_conf 999999999812799999807626689975548999999999999-71898999980436297