HHsearch alignment of GI: 254781054 and MMDB domain: 1t9k_A_114-347
>1t9k_A (A:114-347) Probable methylthioribose-1-phosphate isomerase; structural genomics, translation initiation factor, AIF-2B subunit, PSI; 2.60A {Thermotoga maritima}
Probab=96.72 E-value=0.033 Score=34.09 Aligned_cols=132 Identities=18% Similarity=0.180 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHHHHCCCCCEEEE-CCCHHHHHHHH-----HHHHHHHCCCEEEE-EECH-------HHHHHHHHHCCCCC
Q ss_conf 89999999999983899789988-79178999999-----99998732870489-6188-------99999987315786
Q gi|254781054|r 4 LQMKRNAARRAIQYVVDGMTLGM-GTGSTAKEFMI-----LLADKIANGFRVQV-IPSS-------RNTENFCKIHHIPL 69 (231)
Q Consensus 4 ~~~K~~~a~~A~~~v~~gmviGl-GtGSTv~~~i~-----~L~~~~~~~~~i~~-v~tS-------~~t~~~a~~~gi~~ 69 (231)
.+..+..++.+.++|++|++|-. |-.+||..|+. .+....+.+.+.++ |+-| .-+...+.+.|||+
T Consensus 19 ~~~~~~I~~~~~~~i~d~~~ILT~g~S~~V~~~L~~aa~~~~~~a~~~~~~f~V~v~es~P~~~G~~~~a~~l~~~gi~v 98 (234)
T 1t9k_A 19 IEVNKAIGKNGAQLIKDGSTILTHCNAGALATVDYGTALGVIRAAVESGKRIRVFADETRPYLQGARLTAWELXKDGIEV 98 (234)
T ss_dssp HHHHHHHHHHHHTTSCTTEEEEECSCCSGGGSSSSCSHHHHHHHHHHTTCCEEEEEECCTTTTHHHHTHHHHHHTTTCEE
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHEEHHHHHHHCEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCE
T ss_conf 99989989877876147977999448403320001112201014550694379998238653468899999987606734
Q ss_pred CCCCC--------CCEEEEEECCHHCCCCCCEEEECCCHHHHHHHHHHH-HHCCEEEEEEHHHCCCCCC-CCCCCEEE
Q ss_conf 55100--------880079863300047660588316577777879986-1022699962303513455-78872678
Q gi|254781054|r 70 HSPED--------VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAH-AASRFIVIGDESKRVDFLG-RGMLPIEI 137 (231)
Q Consensus 70 ~~l~~--------~~~iDi~iDGaDevd~~l~lIKGgGgAl~rEKiva~-~a~~~I~i~D~sK~v~~Lg-~~plPVEV 137 (231)
.-..+ ..++|..+=|||-|-+|+.++---|.++.- ++|. ...-++++++..|+.+.-- ....+.|.
T Consensus 99 ~~i~ds~~~~~~~m~~vd~VllGA~~v~~nG~i~n~~Gt~~ia--~~Ak~~~vPv~v~ae~~K~~~~~~~~~~~~~e~ 174 (234)
T 1t9k_A 99 YVITDNXAGWLXKRGLIDAVVVGADRIALNGDTANKIGTYSLA--VLAKRNNIPFYVAAPVSTIDPTIRSGEEIPIEE 174 (234)
T ss_dssp EEECGGGHHHHHHTTCCSEEEECCSEEETTSCEEEETTHHHHH--HHHHHTTCCEEEECCGGGEETTCSSGGGSCCCB
T ss_pred EEECCHHHHHHHHCCCCCEEEEECCEEECCCCEEECCCHHHHH--HHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCC
T ss_conf 7730105888863065545885010542379864326789999--999873887599840367687788804276504