HHsearch alignment of GI: 254781054 and MMDB domain: 2yvk_A_
>2yvk_A (A:) Methylthioribose-1-phosphate isomerase; methionine salvage pathway,; HET: MRU; 2.40A {Bacillus subtilis} PDB: 2yrf_A*
Probab=95.17 E-value=0.26 Score=28.55 Aligned_cols=132 Identities=20% Similarity=0.103 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHCCCCCEEEECCCH---------HHHHHHHHHHHHHHCCCEEEEEEC-----H-HHHHHHHHHCCCCC
Q ss_conf 99999999999838997899887917---------899999999998732870489618-----8-99999987315786
Q gi|254781054|r 5 QMKRNAARRAIQYVVDGMTLGMGTGS---------TAKEFMILLADKIANGFRVQVIPS-----S-RNTENFCKIHHIPL 69 (231)
Q Consensus 5 ~~K~~~a~~A~~~v~~gmviGlGtGS---------Tv~~~i~~L~~~~~~~~~i~~v~t-----S-~~t~~~a~~~gi~~ 69 (231)
+..+..++.+.++|++|++|--=+-| |+...+....++ ...+++.+.-| . .-|+..+.+.|||+
T Consensus 158 ~a~~~I~~~~~~~i~~g~~ILT~~~S~~v~~~l~~ta~~~i~~a~~~-gk~~~V~v~EsrP~~eG~~l~a~~L~~~GI~v 236 (374)
T 2yvk_A 158 ETCRLIGQNALQLFKKGDRIMTICNAGSIATSRYGTALAPFYLAKQK-DLGLHIYACETRPVLQGSRLTAWELMQGGIDV 236 (374)
T ss_dssp HHHHHHHHHHGGGCCTTCEEEECSCCSTTTSSSSCSTTHHHHHHHHT-TCCCEEEEECCTTTTHHHHTHHHHHHTTTCEE
T ss_pred HHHHHHHHHHHHEECCCCEEEEECCCCCEEEEEHHHHHHHHHHHHCC-CCCCEEEECCCCCCCCHHHHHHHEEHHCCCCE
T ss_conf 99999999976532489889774277411321112156778876414-65514663244334521223320002046632
Q ss_pred CCCCCC--------CEEEEEECCHHCCCCCCEEEECCCHHHHHHHHHH-HHHCCEEEEEEHHHCCCCCCC-CCCCEEEEE
Q ss_conf 551008--------8007986330004766058831657777787998-610226999623035134557-887267872
Q gi|254781054|r 70 HSPEDV--------SSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA-HAASRFIVIGDESKRVDFLGR-GMLPIEIDQ 139 (231)
Q Consensus 70 ~~l~~~--------~~iDi~iDGaDevd~~l~lIKGgGgAl~rEKiva-~~a~~~I~i~D~sK~v~~Lg~-~plPVEV~p 139 (231)
.-..+. ..+|..+=|||-|..|+.++--=|-..+= ++| ....-|++++..+|+....-. ...|+|--+
T Consensus 237 tlI~Dsa~~~~m~~~~vd~VivGAd~I~~nG~v~nkiGT~~iA--l~Ak~~~vPvyV~a~s~Kf~~~~~~~~~~~~e~~~ 314 (374)
T 2yvk_A 237 TLITDSMAAHTMKEKQISAVIVGADRIAKNGDTANKIGTYGLA--ILANAFDIPFFVAAPLSTFDTKVKCGADIPIEERD 314 (374)
T ss_dssp EEECGGGHHHHHHHTTCCEEEECCSEEETTCCEEEETTHHHHH--HHHHHTTCCEEEECCGGGEETTCSSGGGSCCCBCC
T ss_pred EEEECCCHHHHHHHCCCCEEEECCEEEECCCCCCCCCCHHHHH--HHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 8997230788765136544875222785489700344388999--99987088589980346647677885534152478