HHsearch results for GI: 254781054 and protein with PDBid: 1lk5_A
>1lk5_A D-ribose-5-phosphate isomerase; alpha/beta structure; 1.75A {Pyrococcus horikoshii} SCOP: c.124.1.4 d.58.40.1 PDB: 1lk7_A*
Probab=100.00 E-value=0 Score=558.71 Aligned_cols=226 Identities=40% Similarity=0.648 Sum_probs=219.2
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCC--CEEEEEECHHHHHHHHHHCCCCCCCCCCCCEE
Q ss_conf 9878999999999998389978998879178999999999987328--70489618899999987315786551008800
Q gi|254781054|r 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSV 78 (231)
Q Consensus 1 M~~~~~K~~~a~~A~~~v~~gmviGlGtGSTv~~~i~~L~~~~~~~--~~i~~v~tS~~t~~~a~~~gi~~~~l~~~~~i 78 (231)
||++++|++||++|++||++||+||||||||+++||++|+++++++ .++++||||.+|+.+|+++|||+.+++++++|
T Consensus 1 M~~~~~K~~aA~~A~~~V~~gmvvGLGtGsTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~a~~~gi~~~~~~~~~~i 80 (229)
T 1lk5_A 1 MNVEEMKKIAAKEALKFIEDDMVIGLGTGSTTAYFIKLLGEKLKRGEISDIVGVPTSYQAKLLAIEHDIPIASLDQVDAI 80 (229)
T ss_dssp CCHHHHHHHHHHHHGGGCCTTCEEEECCSHHHHHHHHHHHHHHHTTSSCSCEEEESSHHHHHHHHHTTCCBCCGGGCSCE
T ss_pred CCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCE
T ss_conf 99899999999999964799999995864899999999999875255565078745699999999779945441225641
Q ss_pred EEEECCHHCCCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEEHHHCCCCCC-CCCCCEEEEECCHHHHHHHHHHHHHHCC
Q ss_conf 798633000476605883165777778799861022699962303513455-7887267872575899999986322148
Q gi|254781054|r 79 DLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLG-RGMLPIEIDQFGVNKTLSALKEVASCFG 157 (231)
Q Consensus 79 Di~iDGaDevd~~l~lIKGgGgAl~rEKiva~~a~~~I~i~D~sK~v~~Lg-~~plPVEV~p~~~~~v~~~l~~~~~~~G 157 (231)
|+|||||||||+++|+||||||||+|||++|++|++||||+|+||+|++|| +|||||||+||+|.++.+.++ .+|
T Consensus 81 Dv~iDGaDevd~~l~liKGGGGal~rEKivA~~a~~~i~I~D~~K~v~~Lg~~~plpvEV~p~~~~~v~~~l~----~~g 156 (229)
T 1lk5_A 81 DVAVDGADEVDPNLNLIKGRGAALTMEKIIEYRAGTFIVLVDERKLVDYLCQKMPVPIEVIPQAWKAIIEELS----IFN 156 (229)
T ss_dssp EEEEECCSEECTTCCEECCTTSCHHHHHHHHHTEEEEEEEEEGGGBCSSTTSSCCEEEEECGGGHHHHHHHGG----GGT
T ss_pred EEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEECCHHHHHHHHHHH----HHC
T ss_conf 1784162443400576762006788899999853036999742210000578788065876367999999999----728
Q ss_pred CCCEEEEEECCCCCEECCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEECCEECCCCCEEEEECCCCEEEEEEC
Q ss_conf 98503772258863625788889982079868989999996279968664802476778999779984999879
Q gi|254781054|r 158 LNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231 (231)
Q Consensus 158 ~~~~lR~~~~~~gp~iTDnGN~IlD~~~~~i~dp~~le~~L~~IpGVVe~GlF~~~~d~viv~~~dG~~~vl~k 231 (231)
+.+++|.+.++++||+|||||||+||+|++|.||.+++.+|++||||||||||.++++.++||+++| +++++|
T Consensus 157 ~~~~lr~~~~~~~p~vTD~GN~IlD~~~~~i~dp~~l~~~L~~ipGVVe~GlF~~~a~~vii~~~~g-v~~i~k 229 (229)
T 1lk5_A 157 AKAELRMGVNKDGPVITDNGNFIIDAKFPRIDDPLDMEIELNTIPGVIENGIFADIADIVIVGTREG-VKKLER 229 (229)
T ss_dssp CEEEECBCSSSSSBCCCTTSCEEEEEECSCCSCHHHHHHHHHTSTTEEEESEECSCCCEEEEEETTE-EEEEEC
T ss_pred CCCEEEEEECCCCCEECCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEECEECCCCCEEEEECCCC-EEEEEC
T ss_conf 9955977753899637369986996788997999999999878986996486578699999971990-799719