HHsearch results for GI: 254781054 and protein with PDBid: 1poi_B
>1poi_B Glutaconate coenzyme A-transferase; COA, glutamate, protein fermentation; 2.50A {Acidaminococcus fermentans} SCOP: c.124.1.3
Probab=96.35 E-value=0.0023 Score=40.33 Aligned_cols=117 Identities=18% Similarity=0.184 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHH-CCCE-------EEEEEC----HHHHHHHHHHCC-------
Q ss_conf 999999999983899789988791789999999999873-2870-------489618----899999987315-------
Q gi|254781054|r 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFR-------VQVIPS----SRNTENFCKIHH------- 66 (231)
Q Consensus 6 ~K~~~a~~A~~~v~~gmviGlGtGSTv~~~i~~L~~~~~-~~~~-------i~~v~t----S~~t~~~a~~~g------- 66 (231)
.+++.|..|+..+++|+++-+|.|.- ...-.|+++.. .... +-..|. |...........
T Consensus 7 ~~E~ma~~aArel~dg~~v~~GiGiP--~laa~lA~~~~~p~~~l~~e~G~~g~~p~~~~~s~~d~~~~~~~~~~~~~~~ 84 (260)
T 1poi_B 7 NKEMQAVTIAKQIKNGQVVTVGTGLP--LIGASVAKRVYAPDCHIIVESGLMDCSPVEVPRSVGDLRFMAHCGCIWPNVR 84 (260)
T ss_dssp HHHHHHHHHHTTCCTTCEEECCSSHH--HHHHHHHHHTTCTTCEEEETTTEEEECCSSCCSSTTCHHHHTSEEEECCHHH
T ss_pred HHHHHHHHHHHHCCCCCEEEECCHHH--HHHHHHHHHHCCCCEEEEECCCEECCCCCCCCCCCCCHHHHCCCCEECCCCE
T ss_conf 89999999997467999999924188--9999999973599749997886737768888765573133145632247522
Q ss_pred ---CCCCCCCCCCEEEEEECCHHCCCCCCEE--------------EECCCHHHHHHHHHHHHHCCEEEEEEHHH--CCCC
Q ss_conf ---7865510088007986330004766058--------------83165777778799861022699962303--5134
Q gi|254781054|r 67 ---IPLHSPEDVSSVDLSIDGFDEIDSRLRL--------------IKGYGGALLREKIIAHAASRFIVIGDESK--RVDF 127 (231)
Q Consensus 67 ---i~~~~l~~~~~iDi~iDGaDevd~~l~l--------------IKGgGgAl~rEKiva~~a~~~I~i~D~sK--~v~~ 127 (231)
..+.++-.-.++|++|=||=|||..+|+ +-|.|||.- +++.++++|+. .++| +|+.
T Consensus 85 ~~~~~~F~~~~~G~~dv~fLGa~QID~~GnvN~s~ig~~~~P~~rlpG~GGa~d----i~~~a~~ii~~-~h~~r~fV~~ 159 (260)
T 1poi_B 85 FVGFEINEYLHKANRLIAFIGGAQIDPYGNVNSTSIGDYHHPKTRFTGSGGANG----IATYSNTIIMM-QHEKRRFMNK 159 (260)
T ss_dssp HHHHHHHHHHHTCCCEEEEECCSEECTTCCEECSEEECSSSEEEECCCCTTHHH----HHHHSCEEEEC-CCCTTTBCSS
T ss_pred ECCHHHHHHHHCCCCCEEEECHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH----HHCCCCEEEEE-CCCCCCCCCC
T ss_conf 050888899866897679967578283457230100675578831016776105----55358657984-2575445664
Q ss_pred CC
Q ss_conf 55
Q gi|254781054|r 128 LG 129 (231)
Q Consensus 128 Lg 129 (231)
+.
T Consensus 160 vd 161 (260)
T 1poi_B 160 ID 161 (260)
T ss_dssp CS
T ss_pred CC
T ss_conf 40