HHsearch results for GI: 254781054 and protein with PDBid: 1t9k_A
>1t9k_A Probable methylthioribose-1-phosphate isomerase; structural genomics, translation initiation factor, AIF-2B subunit, PSI; 2.60A {Thermotoga maritima} SCOP: c.124.1.5
Probab=96.36 E-value=0.057 Score=31.67 Aligned_cols=131 Identities=20% Similarity=0.178 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEC--CC-------HHHHHHHHHHHHHHHCCCEEEEEEC--------HHHHHHHHHHCCC
Q ss_conf 99999999999838997899887--91-------7899999999998732870489618--------8999999873157
Q gi|254781054|r 5 QMKRNAARRAIQYVVDGMTLGMG--TG-------STAKEFMILLADKIANGFRVQVIPS--------SRNTENFCKIHHI 67 (231)
Q Consensus 5 ~~K~~~a~~A~~~v~~gmviGlG--tG-------STv~~~i~~L~~~~~~~~~i~~v~t--------S~~t~~~a~~~gi 67 (231)
+..+..++.+.+++++|.+|=-= || .|+..++....+ .|.+.+++.+ +.-|+..+.+.||
T Consensus 133 ~~~~~i~~~g~~~i~~g~~iLTh~~s~~lat~~~gTal~~i~~a~~---~gk~~~V~v~EtrP~~qG~~lta~~L~~~GI 209 (347)
T 1t9k_A 133 EVNKAIGKNGAQLIKDGSTILTHCNAGALATVDYGTALGVIRAAVE---SGKRIRVFADETRPYLQGARLTAWELMKDGI 209 (347)
T ss_dssp HHHHHHHHHHHTTSCTTEEEEECSCCSGGGSSSSCSHHHHHHHHHH---TTCCEEEEEECCTTTTHHHHTHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCHHHEECCCCHHHHEEEEEE---CCCEEEEEECCCCCCCCHHHHHHHHHHHCCC
T ss_conf 9999999855775348988998558751310134320102367750---6954799962688766316889999865482
Q ss_pred CCCCCCCC--------CEEEEEECCHHCCCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEEHHHCCCCCC-CCCCCEEEE
Q ss_conf 86551008--------800798633000476605883165777778799861022699962303513455-788726787
Q gi|254781054|r 68 PLHSPEDV--------SSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLG-RGMLPIEID 138 (231)
Q Consensus 68 ~~~~l~~~--------~~iDi~iDGaDevd~~l~lIKGgGgAl~rEKiva~~a~~~I~i~D~sK~v~~Lg-~~plPVEV~ 138 (231)
|+.-.-+. ..+|..+=|||-|..|+.++--=|-..+- -+-.....-|++.+..+|+.+..- ...+|+|--
T Consensus 210 ~~tlI~D~a~~~~m~~~~Vd~VivGAd~v~~nG~v~nkiGT~~~A-l~A~~~~vPfyV~a~~~k~~~~~~~~~~i~ie~r 288 (347)
T 1t9k_A 210 EVYVITDNMAGWLMKRGLIDAVVVGADRIALNGDTANKIGTYSLA-VLAKRNNIPFYVAAPVSTIDPTIRSGEEIPIEER 288 (347)
T ss_dssp EEEEECGGGHHHHHHTTCCSEEEECCSEEETTSCEEEETTHHHHH-HHHHHTTCCEEEECCGGGEETTCSSGGGSCCCBC
T ss_pred EEEEEECCHHHHHHHHCCCCEEEECCCCCCCCCCEEECCCHHHHH-HHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 289996548888865344007885010024689788730539999-9988649846997123543777788142765156
Q ss_pred E
Q ss_conf 2
Q gi|254781054|r 139 Q 139 (231)
Q Consensus 139 p 139 (231)
+
T Consensus 289 ~ 289 (347)
T 1t9k_A 289 R 289 (347)
T ss_dssp C
T ss_pred C
T ss_conf 9