HHsearch results for GI: 254781054 and protein with PDBid: 2nvv_A
>2nvv_A Acetyl-COA hydrolase/transferase family protein; alpha beta protein, structural genomics, PSI-2, protein structure initiative; 2.70A {Porphyromonas gingivalis}
Probab=91.91 E-value=0.12 Score=29.70 Aligned_cols=115 Identities=18% Similarity=0.285 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHHCCCCCEEEECC--CH-HHHHHHHHHHHHHHC----C--CEEEEE-----------------------E
Q ss_conf 99999999998389978998879--17-899999999998732----8--704896-----------------------1
Q gi|254781054|r 6 MKRNAARRAIQYVVDGMTLGMGT--GS-TAKEFMILLADKIAN----G--FRVQVI-----------------------P 53 (231)
Q Consensus 6 ~K~~~a~~A~~~v~~gmviGlGt--GS-Tv~~~i~~L~~~~~~----~--~~i~~v-----------------------~ 53 (231)
.|..-|.+|+++|+||++|.+|. |. +-..++++|++|..+ + ++++.+ +
T Consensus 3 ~Kiita~EA~~~IkdGd~V~~~Gf~~~g~P~~l~~AL~~r~~~~~~~g~~~~ltl~~~~~~g~~~~~~la~~~~~~~~~~ 82 (506)
T 2nvv_A 3 LRFITAEEAAEFVHHNDNVGFSGFTPAGNPKVVPAAIAKRAIAAHEKGNPFKIGMFTGASTGARLDGVLAQADAVKFRTP 82 (506)
T ss_dssp CCBCCHHHHHTTCCTTCEEEECCSSSTTCCCSHHHHHHHHHHHHHTTTCCCCEEEECSSCCCTTTHHHHHHTTCEEEEES
T ss_pred CCEEEHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEC
T ss_conf 75334999997589979999868888657699999999999973667886248999734647754441124895599934
Q ss_pred --CHHHHHHHHHHCCCCCCCC--C---------CCCEEEEEECCHHCCCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEE
Q ss_conf --8899999987315786551--0---------08800798633000476605883165777778799861022699962
Q gi|254781054|r 54 --SSRNTENFCKIHHIPLHSP--E---------DVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120 (231)
Q Consensus 54 --tS~~t~~~a~~~gi~~~~l--~---------~~~~iDi~iDGaDevd~~l~lIKGgGgAl~rEKiva~~a~~~I~i~D 120 (231)
++...+..+.+-.+...+. . ...++|+++--+-..|.++|+.=|...... ..++.+|++.|.-++
T Consensus 83 ~~~g~~~r~~i~~G~i~~~p~~~s~~~~~~r~~~~~~~DVali~~s~~D~~G~~s~g~s~~~~--~~~~~~A~~VI~evn 160 (506)
T 2nvv_A 83 YQSNKDLRNLINNGSTSYFDLHLSTLAQDLRYGFYGKVDVAIIEVADVTEDGKILPTTGVGIL--PTICRLADRIIVELN 160 (506)
T ss_dssp CCCCHHHHHHHHTTSSEECCCCGGGHHHHHHTTSSCCCCEEEEEESEECTTSEEECCSBCBTH--HHHHHHCSEEEEEEE
T ss_pred CCCCHHHHHHHHCCCCEEECCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEECCCCCCH--HHHHHHCCEEEEEEE
T ss_conf 888999999998599559875352699999844668984899997587889988334773307--999974999999954
Q ss_pred HH
Q ss_conf 30
Q gi|254781054|r 121 ES 122 (231)
Q Consensus 121 ~s 122 (231)
++
T Consensus 161 ~~ 162 (506)
T 2nvv_A 161 DK 162 (506)
T ss_dssp TT
T ss_pred CC
T ss_conf 57