HHSEARCH alignment of GI: 254781054 and SCOP domain: d1k6da_

Alignment
>d1k6da_ c.124.1.2 (A:) Acetate:CoA transferase alpha {Escherichia coli [TaxId: 562]}
Probab=96.68  E-value=0.00065  Score=42.29  Aligned_cols=118  Identities=20%  Similarity=0.149  Sum_probs=68.0

Q ss_pred             HHHHHHHHHHHCCCCCEEEECC---CHHHHHHHHHHHHHHHCCCEE----------------------EE----EECHHH
Q ss_conf             9999999998389978998879---178999999999987328704----------------------89----618899
Q gi|254781054|r    7 KRNAARRAIQYVVDGMTLGMGT---GSTAKEFMILLADKIANGFRV----------------------QV----IPSSRN   57 (231)
Q Consensus         7 K~~~a~~A~~~v~~gmviGlGt---GSTv~~~i~~L~~~~~~~~~i----------------------~~----v~tS~~   57 (231)
                      |..-+++|+++|+|||+|++|.   ..+-..++.+|.++....+.+                      ..    ...+..
T Consensus         4 K~~s~~eAv~~IkdGd~V~~gGf~~~g~P~al~~aL~~~~~k~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (219)
T d1k6da_           4 KLMTLQDATGFFRDGMTIMVGGFMGIGTPSRLVEALLESGVRDLTLIANDTAFVDTGIGPLIVNGRVRKVIASHIGTNPE   83 (219)
T ss_dssp             SEECHHHHGGGCCTTCEEEECCBTTBTCCHHHHHHHHHHTCCSEEEECSBCCCTTSTTHHHHHTTCEEEEEESBCTTCHH
T ss_pred             CCCCHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHCCCCCCEECCCCCCCHH
T ss_conf             40639999965999899998682675879999999998476776025457874731013455404344225365456756


Q ss_pred             HHHHHHHCCCCCCCCC---------------------------------------------CCCEEEEEECCHHCCCCCC
Q ss_conf             9999873157865510---------------------------------------------0880079863300047660
Q gi|254781054|r   58 TENFCKIHHIPLHSPE---------------------------------------------DVSSVDLSIDGFDEIDSRL   92 (231)
Q Consensus        58 t~~~a~~~gi~~~~l~---------------------------------------------~~~~iDi~iDGaDevd~~l   92 (231)
                      .+...++-.+......                                             ...++|++|=-|-..|.++
T Consensus        84 ~~~~~~~g~ie~~~~~~g~~~~~~ra~a~g~p~~~~~~~~Gt~~~~~~~~~~~~g~~~~~~~a~~~DVAiI~a~~aD~~G  163 (219)
T d1k6da_          84 TGRRMISGEMDVVLVPQGTLIEQIRCGGAGLGGFLTPTGVGTVVEEGKQTLTLDGKTWLLERPLRADLALIRAHRCDTLG  163 (219)
T ss_dssp             HHHHHHTTSSEEEECCHHHHHHHHHHHHTTCCEEEESTTTTCC--CCSCEEEETTEEEEEECCCCEEEEEEEEEEEETTC
T ss_pred             HHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCCEEEECCCCCEECCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCC
T ss_conf             78876269846998233478999998647998505403436512268732334787325640346888999850578998


Q ss_pred             EEEECCCHHHHHHHHHHHHHCCEEEEEEHHHCCCC
Q ss_conf             58831657777787998610226999623035134
Q gi|254781054|r   93 RLIKGYGGALLREKIIAHAASRFIVIGDESKRVDF  127 (231)
Q Consensus        93 ~lIKGgGgAl~rEKiva~~a~~~I~i~D~sK~v~~  127 (231)
                      |+.=.+.+..+.+ ..|.+|++.|+-|++  .|+.
T Consensus       164 N~~~~~~~~~~~~-~~a~Aa~~VIv~ve~--iv~~  195 (219)
T d1k6da_         164 NLTYQLSARNFNP-LIALAADITLVEPDE--LVET  195 (219)
T ss_dssp             CEECCHHHHTTHH-HHHHHEEEEEEEEEE--EECT
T ss_pred             CEEECCCCCCCHH-HHHHHCCCEEEEEEE--EECC
T ss_conf             6566155444179-999859979999967--8737


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: CoA transferase alpha subunit-like
domain: Acetate:CoA transferase alpha
species: Escherichia coli [TaxId: 562]