HHSEARCH alignment of GI: 254781054 and SCOP domain: d1uj4a2

Alignment

Probab=99.91  E-value=6e-25  Score=173.00  Aligned_cols=74  Identities=45%  Similarity=0.807  Sum_probs=69.0

Q ss_pred             CCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEECCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEECC
Q ss_conf             57887267872575899999986322148985037722588636257888899820798689899999962799686648
Q gi|254781054|r  129 GRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHG  208 (231)
Q Consensus       129 g~~plPVEV~p~~~~~v~~~l~~~~~~~G~~~~lR~~~~~~gp~iTDnGN~IlD~~~~~i~dp~~le~~L~~IpGVVe~G  208 (231)
                      |+|||||||+||+|.++.+.|++    +|+++++|+  ++++||+|||||||+||+|+.+.||.+|+.+|++||||||||
T Consensus         1 G~FPlPVEV~pf~~~~v~~~l~~----lg~~~~lR~--~~~~p~iTDnGN~IlD~~~~~i~dp~~l~~~L~~ipGVVe~G   74 (74)
T d1uj4a2           1 GRGPVPVEIVPFGYRATLKAIAD----LGGEPELRM--DGDEFYFTDGGHLIADCRFGPIGDPLGLHRALLEIPGVVETG   74 (74)
T ss_dssp             CSSCEEEEECSTTHHHHHHHHHH----TTCCEEECE--ETTEECCCTTSCEEEEECCCSCSCHHHHHHHHHTSTTEEEES
T ss_pred             CCCCCCEEECHHHHHHHHHHHHH----HCCCCEEEE--CCCCEEEECCCCEEEECCCCCCCCHHHHHHHHHCCCCEECCC
T ss_conf             99871689827289999999998----499746965--599507951997899887899599999999997699876349

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: D-ribose-5-phosphate isomerase (RpiA), lid domain
family: D-ribose-5-phosphate isomerase (RpiA), lid domain
domain: D-ribose-5-phosphate isomerase (RpiA), lid domain
species: Thermus thermophilus [TaxId: 274]