HHSEARCH alignment of GI: 254781054 and SCOP domain: d1xr4a2

Alignment
>d1xr4a2 c.124.1.2 (A:237-505) Putative citrate lyase alpha chain, citF2 {Salmonella typhimurium [TaxId: 90371]}
Probab=93.33  E-value=0.23  Score=26.43  Aligned_cols=110  Identities=20%  Similarity=0.201  Sum_probs=65.7

Q ss_pred             CHHHHHHHHHHHHHHHC------CCCCEEEECCCHHHHHHHHHHHHHHH-CCCEEEE----EECHHHHHHHHHHCCC---
Q ss_conf             87899999999999838------99789988791789999999999873-2870489----6188999999873157---
Q gi|254781054|r    2 DALQMKRNAARRAIQYV------VDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQV----IPSSRNTENFCKIHHI---   67 (231)
Q Consensus         2 ~~~~~K~~~a~~A~~~v------~~gmviGlGtGSTv~~~i~~L~~~~~-~~~~i~~----v~tS~~t~~~a~~~gi---   67 (231)
                      ......++.|+.++++|      +||.++=+|-|+.-.....+|.++.+ .+.+...    ++.+..   .+.+.|.   
T Consensus         6 t~~P~~~~Ia~~~A~~I~~~~~i~DG~tlQlGiG~ip~AV~~~L~~~~~dlgih~e~~~ggitd~~~---~L~~~G~i~~   82 (269)
T d1xr4a2           6 SSNPRELLIARQAANVIEHSGYFCDGFSLQTGTGGASLAVTRFLEDKMRRHNITASFGLGGITGTMV---DLHEKGLIKA   82 (269)
T ss_dssp             CCCHHHHHHHHHHHHHHHTTSCCSTTEEEECCSSHHHHHHHHHHHHHHHHTTCCEEEEEEEECHHHH---HHHHTTSBSC
T ss_pred             CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHH---HCCCCCCEEE
T ss_conf             8986999999999998764576889878996759899999998676454664588787056376301---0260555440


Q ss_pred             -------------------CCCC------------CCCCCEEEEEECCHHCCCCCCE----------EEECCCHHHHHHH
Q ss_conf             -------------------8655------------1008800798633000476605----------8831657777787
Q gi|254781054|r   68 -------------------PLHS------------PEDVSSVDLSIDGFDEIDSRLR----------LIKGYGGALLREK  106 (231)
Q Consensus        68 -------------------~~~~------------l~~~~~iDi~iDGaDevd~~l~----------lIKGgGgAl~rEK  106 (231)
                                         +-..            ...++++|++|-||=|||..+|          ++-|.||..-.  
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~i~~~p~~y~n~~~~i~~~~~ldvsInsAlEVDl~Gnvn~~~~~~g~~~sG~GG~~Df--  160 (269)
T d1xr4a2          83 LLDTQSFDGDAARSLAQNPHHIEISTNQYANPASKGAACERLNVVMLSALEIDVNFNVNVMTGSNGVLRGASGGHSDT--  160 (269)
T ss_dssp             EEEEEECSHHHHHHHHHCTTEEECCHHHHTCTTCSCCGGGGCSEEEECCSEECTTCCEECSBCTTSCBCSBCTTHHHH--
T ss_pred             CCCCEEECCHHHHHHHHCCCCEEEECCCCCCCHHHHHHCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCCCHHHH--
T ss_conf             356346423658788739984798431004863666534872189851004125786578872598502797657787--


Q ss_pred             HHHHHHCCEEEE
Q ss_conf             998610226999
Q gi|254781054|r  107 IIAHAASRFIVI  118 (231)
Q Consensus       107 iva~~a~~~I~i  118 (231)
                        +..|+.-++.
T Consensus       161 --~rGA~~si~~  170 (269)
T d1xr4a2         161 --AAGADLTIIT  170 (269)
T ss_dssp             --HHHSSEEEEE
T ss_pred             --HCCCEEEEEE
T ss_conf             --4585268874


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: CoA transferase alpha subunit-like
domain: Putative citrate lyase alpha chain, citF2
species: Salmonella typhimurium [TaxId: 90371]