HHSEARCH alignment of GI: 254781054 and SCOP domain: d2okga1

Alignment

Probab=95.70  E-value=0.0083  Score=35.40  Aligned_cols=68  Identities=9%  Similarity=0.104  Sum_probs=45.4

Q ss_pred             HHHHHHHHHHHHH----HCCCCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEEE------------CHHHHHHHHHHCCC
Q ss_conf             8999999999998----3899789988791789999999999873287048961------------88999999873157
Q gi|254781054|r    4 LQMKRNAARRAIQ----YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP------------SSRNTENFCKIHHI   67 (231)
Q Consensus         4 ~~~K~~~a~~A~~----~v~~gmviGlGtGSTv~~~i~~L~~~~~~~~~i~~v~------------tS~~t~~~a~~~gi   67 (231)
                      ++.++.+|+.|++    +++++++||+++|+|+..+++.|.... ...++.+|+            ++.-....+.++|-
T Consensus        33 ~~~~~~l~~aaA~~L~~~l~~~~~igvswG~T~~~~~~~l~~~~-~~~~~~~V~l~G~~~~~~~~~~~~i~~~la~~~~~  111 (250)
T d2okga1          33 PWVKKEMGRAAVACMKKRFSGKNIVAVTGGTTIEAVAEMMTPDS-KNRELLFVPARGGLGEDVKNQANTICAHMAEKASG  111 (250)
T ss_dssp             THHHHHHHHHHHHHHHHHCCSEEEEEECCSHHHHHHHHHCCCCT-TCCEEEEEESEEECC---CCHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCC-CCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCC
T ss_conf             69999999999999998667998899958789999999841105-68872899821788877675999999999987299


Q ss_pred             CCCCC
Q ss_conf             86551
Q gi|254781054|r   68 PLHSP   72 (231)
Q Consensus        68 ~~~~l   72 (231)
                      +...+
T Consensus       112 ~~~~l  116 (250)
T d2okga1         112 TYRLL  116 (250)
T ss_dssp             EECCC
T ss_pred             CEEEE
T ss_conf             65644

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: SorC sugar-binding domain-like
domain: Central glycolytic gene regulator CggR
species: Bacillus subtilis [TaxId: 1423]