HHsearch alignment for GI: 254781055 and conserved domain: COG0446

>COG0446 HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only].
Probab=99.96  E-value=3.4e-29  Score=233.25  Aligned_cols=378  Identities=18%  Similarity=0.216  Sum_probs=252.6

Q ss_pred             EEEECCCHHHHHHHHHHHHCC--CCEEEEECCC--CCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHH
Q ss_conf             899889867999999999889--9299997787--861464356827088999999999998410177363775449999
Q gi|254781055|r    7 LVVIGAGSSGVRSARLAAQLG--KKVAICEEYR--VGGTCVIRGCIPKKLMFYASQYSEYFEDSQGFGWSVDHKSFDWQS   82 (461)
Q Consensus         7 vvIIG~GpaG~~aA~~la~~g--~kV~liE~~~--~GGtC~~~GCiPsK~l~~~a~~~~~~~~~~~~g~~~~~~~~d~~~   82 (461)
T Consensus         1 ivivG~g~aG~~aa~~l~~~~~~~~i~i~~~~~~~~~~~~~~-----------------------~~~~--~~~~~~~~~   55 (415)
T COG0446           1 IVIVGGGAAGLSAATTLRRLLLAAEITLIGREPKYSYYRCPL-----------------------SLYV--GGGIASLED   55 (415)
T ss_pred             CEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC-----------------------CEEE--CCCCCCCHH
T ss_conf             989825599999999998507778859995235445555762-----------------------3053--344234002


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCEEECCCC-CCCCCC--CCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCC
Q ss_conf             9999999998554668864300332001223-322222--2222223221100111232277640233203762211237
Q gi|254781055|r   83 LITAQNKELSRLESFYHNRLESAGVEIFASK-GILSSP--HSVYIANLNRTITSRYIVVSTGGSPNRMDFKGSDLCITSD  159 (461)
Q Consensus        83 ~~~~~~~~~~~l~~~~~~~l~~~gv~vi~g~-a~~~~~--~~v~V~~~~~~i~a~~iiIATGs~p~~p~i~g~~~~~ts~  159 (461)
T Consensus        56 ~~~~-------~~----~~-~~~~i~~~~~~~v~~id~~~~~v~~~--~g~~~yd~LvlatGa~~~~~~~~~~~~~~~~~  121 (415)
T COG0446          56 LRYP-------PR----FN-RATGIDVRTGTEVTSIDPENKVVLLD--DGEIEYDYLVLATGARPRPPPISDWEGVVTLR  121 (415)
T ss_pred             HCCC-------CC----HH-HCCCEEECCCCEEEECCCHHCEEEEC--CCCCCCCCEEECCCCCCCCCCCCCCCCCCCHH
T ss_conf             1156-------42----34-31672860364687226123569915--87072652588147655667754222443246


Q ss_pred             CCCCC------CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEECCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf             85112------33334432123454530112442101221000001111222222-321222222222223323322000
Q gi|254781055|r  160 EIFSL------KSLPQSTLIIGGGYIAVEFAGILNSLGSKTTLVTRGNSILSKFD-SDIRQGLTDVMISRGMQVFHNDTI  232 (461)
Q Consensus       160 ~~~~l------~~~P~~i~IiGgG~ig~E~A~~~~~lG~~Vtli~~~~~~l~~~d-~~~~~~~~~~l~~~Gv~i~~~~~v  232 (461)
T Consensus       122 ~~~~~~~~~~~~~~~~~v~vvG~G~~gle~A~~~~~~G~~v~l~e~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v  201 (415)
T COG0446         122 LREDAEALKGGAEPPKDVVVVGAGPIGLEAAEAAAKRGKKVTLIEAADRLGGQLLDPEVAEELAELLEKYGVELLLGTKV  201 (415)
T ss_pred             HHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCEE
T ss_conf             89999876535667773999893499999999998779938999756642331121889999999999729489826526


Q ss_pred             EECCCCCCCCE---EEEECCCCCCCCCCEECCCCEEEECCCCCCCCC-CCCCCCCCCCCCCCCCCC-EEEEEEECCCCCC
Q ss_conf             11024457610---243127532222100001522200126841123-211235433445743000-0355871254326
Q gi|254781055|r  233 ESVVSESGQLK---SILKSGKIVKTDQVILAVGRTPRTTGIGLEKVG-VKMDENGFIITDCYSRTN-VQSIFSLGDISGH  307 (461)
Q Consensus       233 ~~i~~~~~~~~---~~~~~g~~~~~D~vl~a~Gr~Pn~~~l~L~~~g-i~~~~~G~i~vd~~~~Ts-~~~IyA~GDv~g~  307 (461)
T Consensus       202 ~~i~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~p~~~l~--~~~~~~~~~~~g~i~v~~~~~~~~~~~vya~GD~~~~  279 (415)
T COG0446         202 VGVEGKGNTLVVERVVGIDGEEIKADLVIIGPGERPNVVLA--NDALPGLALAGGAVLVDERGGTSKDPDVYAAGDVAEI  279 (415)
T ss_pred             EEEEECCCCEEEEEEEEEEEEEECCCEEEECCCCCCCCCCC--CCCCCCCCCCCCCEEEECCCCEECCCCEEEECCCEEC
T ss_conf             99992586215544566530352233698789757761015--4654440137872999824542166888980332002


Q ss_pred             C----------CCCCHHHCCCCCCHHHHCCCCCCCCCCCCCCCCEE--EHHHHHHHCCCHHHHHHCCCCEEEEEEEECCC
Q ss_conf             4----------31000000111101220588754332333333123--06887551689889985499479999830313
Q gi|254781055|r  308 I----------QLTPVAIHAAACFVETVFKDNPTIPDYDLVPTAVF--SKPEIASVGLTEEEAVQKFCRLEIYKTKFFPM  375 (461)
Q Consensus       308 ~----------~l~~~A~~~g~~aa~~i~~~~~~~~~~~~ip~~if--t~peiA~VG~te~~a~~~~~~~~v~~~~~~~~  375 (461)
T Consensus       280 ~~~~~~~~~~~~~~~~a~~~~~i~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~-~~~~~~~~~~  353 (415)
T COG0446         280 PAAETGKGGRIALWAIAVAAGRIAAENIAGA-LRI--PGLLGTVISDVGDLCAASTGLTEG--KERGID-VVLVVSGGKD  353 (415)
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC-CCC--CCCCCCEEEECCCEEEEEEEECCC--CEEEEE-EEEEECCCCC
T ss_conf             4432220123101244554300245540344-333--323451144047614677750355--223345-5566414565


Q ss_pred             HHH-HHCCCCCEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHCCC
Q ss_conf             668-7479984079999978998699999981998899999999998679878996378
Q gi|254781055|r  376 KCF-LSKRFEHTIMKIIVHADNHKVLGVHILGHEASEIIQVLGVCLKAGCVKKDFDRCM  433 (461)
Q Consensus       376 ~~~-~~~~~~~g~~kli~~~~~~~iLG~~~vg~~A~elI~~~~~ai~~~~t~~~l~~~~  433 (461)
T Consensus       354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~  410 (415)
T COG0446         354 PRAHLYPGAELVGIKLVGDADTGRILGGQE-LE-VLKRIGALALAIGLGDTVAELDALD  410 (415)
T ss_pred             CHHHCCCCCCCCCEEEEECCCCCCCCCCHH-HH-HHHHHHHHHHHHHHCCCCHHHHHCC
T ss_conf             311126776433303541155210022101-36-8888644555410101200212010