HHsearch alignment for GI: 254781055 and conserved domain: COG0446
>COG0446 HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only].
Probab=97.60 E-value=0.00039 Score=49.26 Aligned_cols=94 Identities=28% Similarity=0.456 Sum_probs=58.1
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCC-CCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHH
Q ss_conf 468998898679999999998899299997787-8614643568270889999999999984101773637754499999
Q gi|254781055|r 5 YDLVVIGAGSSGVRSARLAAQLGKKVAICEEYR-VGGTCVIRGCIPKKLMFYASQYSEYFEDSQGFGWSVDHKSFDWQSL 83 (461)
Q Consensus 5 yDvvIIG~GpaG~~aA~~la~~g~kV~liE~~~-~GGtC~~~GCiPsK~l~~~a~~~~~~~~~~~~g~~~~~~~~d~~~~ 83 (461)
T Consensus 137 ~~v~vvG~G~~gle~A~~~~~~G~~v~l~e~~~~~~~~~~------------------------------------~~~~ 180 (415)
T COG0446 137 KDVVVVGAGPIGLEAAEAAAKRGKKVTLIEAADRLGGQLL------------------------------------DPEV 180 (415)
T ss_pred CEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCC------------------------------------CHHH
T ss_conf 7399989349999999999877993899975664233112------------------------------------1889
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEECCCCCC--CC-CCCCC----CCCCCCCCEEEEEEEECCCCCEE
Q ss_conf 99999999855466886430033200122332--22-22222----22232211001112322776402
Q gi|254781055|r 84 ITAQNKELSRLESFYHNRLESAGVEIFASKGI--LS-SPHSV----YIANLNRTITSRYIVVSTGGSPN 145 (461)
Q Consensus 84 ~~~~~~~~~~l~~~~~~~l~~~gv~vi~g~a~--~~-~~~~v----~V~~~~~~i~a~~iiIATGs~p~ 145 (461)
T Consensus 181 -----------~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~p~ 238 (415)
T COG0446 181 -----------AEELAELLEKYGVELLLGTKVVGVEGKGNTLVVERVVGIDGEEIKADLVIIGPGERPN 238 (415)
T ss_pred -----------HHHHHHHHHHCCCEEECCCEEEEEEECCCCEEEEEEEEEEEEEECCCEEEECCCCCCC
T ss_conf -----------9999999997294898265269999258621554456653035223369878975776