HHsearch alignment for GI: 254781055 and conserved domain: COG2072
>COG2072 TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism].
Probab=96.57 E-value=0.0022 Score=43.72 Aligned_cols=101 Identities=17% Similarity=0.260 Sum_probs=59.7
Q ss_pred CCCCCCCCCCCCCHHHHHHHCCCCC-CCEECCCCCCCCC----------------------C----CC------CCCCCC
Q ss_conf 4432123454530112442101221-0000011112222----------------------2----23------212222
Q gi|254781055|r 169 QSTLIIGGGYIAVEFAGILNSLGSK-TTLVTRGNSILSK----------------------F----DS------DIRQGL 215 (461)
Q Consensus 169 ~~i~IiGgG~ig~E~A~~~~~lG~~-Vtli~~~~~~l~~----------------------~----d~------~~~~~~ 215 (461)
T Consensus 9 ~~v~IIGaG~sGlaaa~~L~~~g~~~~~i~Ek~~~~Gg~W~~~ry~~l~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~y~ 88 (443)
T COG2072 9 TDVAIIGAGQSGLAAAYALKQAGVPDFVIFEKRDDVGGTWRYNRYPGLRLDSPKWLLGFPFLPFRWDEAFAPFAEIKDYI 88 (443)
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 54899898788999999999759986799970576678655566871676797401158888877655677764389999
Q ss_pred CCCCCCCC----CCCCCCCEEEECCCCCCCCEEEEECCCCC--CCCCCEECCCC--EEEECC
Q ss_conf 22222223----32332200011024457610243127532--22210000152--220012
Q gi|254781055|r 216 TDVMISRG----MQVFHNDTIESVVSESGQLKSILKSGKIV--KTDQVILAVGR--TPRTTG 269 (461)
Q Consensus 216 ~~~l~~~G----v~i~~~~~v~~i~~~~~~~~~~~~~g~~~--~~D~vl~a~Gr--~Pn~~~ 269 (461)
T Consensus 89 ~~~~~~y~~~~~i~~~~~v~~~~~~~~~~~w~V~~~~~~~~~~~a~~vV~ATG~~~~P~iP~ 150 (443)
T COG2072 89 KDYLEKYGLRFQIRFNTRVEVADWDEDTKRWTVTTSDGGTGELTADFVVVATGHLSEPYIPD 150 (443)
T ss_pred HHHHHHHCCEEEEECCCCEEEEEEECCCCEEEEEECCCCCCEEECCEEEECCCCCCCCCCCC
T ss_conf 99999835604502145256886305887069996488752251267998305789897888