HHsearch alignment for GI: 254781055 and conserved domain: KOG1336

Probab=96.86  E-value=0.001  Score=46.10  Aligned_cols=96  Identities=20%  Similarity=0.346  Sum_probs=64.7

Q ss_pred             CCCCCCCCCCCCCHHHHHHHCCCC--CCCEECCCCCCCCC-----------CCCCCCCCCCCCCCCCCCCCCCCCEEEEC
Q ss_conf             443212345453011244210122--10000011112222-----------22321222222222223323322000110
Q gi|254781055|r  169 QSTLIIGGGYIAVEFAGILNSLGS--KTTLVTRGNSILSK-----------FDSDIRQGLTDVMISRGMQVFHNDTIESV  235 (461)
Q Consensus       169 ~~i~IiGgG~ig~E~A~~~~~lG~--~Vtli~~~~~~l~~-----------~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i  235 (461)
T Consensus        75 r~fvivGgG~~g~vaie~~r~~g~~~ri~l~~~~~-~~pydr~~Ls~~~~~~~~~~a~r~~e~Yke~gIe~~~~t~v~~~  153 (478)
T KOG1336          75 RHFVIVGGGPGGAVAIETLRQVGFTERIALVKREY-LLPYDRARLSKFLLTVGEGLAKRTPEFYKEKGIELILGTSVVKA  153 (478)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCC-CCCCCCHHCCCCEEECCCCCCCCCHHHHHHCCCEEEECCEEEEE
T ss_conf             44999768820335576677528876607874233-47654000133201014562105826676538237970305886


Q ss_pred             CCCCCCCEEEEECCCCCCCCCCEECCCCEEEE
Q ss_conf             24457610243127532222100001522200
Q gi|254781055|r  236 VSESGQLKSILKSGKIVKTDQVILAVGRTPRT  267 (461)
Q Consensus       236 ~~~~~~~~~~~~~g~~~~~D~vl~a~Gr~Pn~  267 (461)
T Consensus       154 D~~~--K~l~~~~Ge~~kys~LilATGs~~~~  183 (478)
T KOG1336         154 DLAS--KTLVLGNGETLKYSKLIIATGSSAKT  183 (478)
T ss_pred             ECCC--CEEEECCCCEEECCEEEEEECCCCCC
T ss_conf             4146--57996798353010699961576665