HHsearch alignment for GI: 254781055 and conserved domain: PRK04965
>PRK04965 nitric oxide reductase; Provisional.
Probab=100.00 E-value=0 Score=371.27 Aligned_cols=356 Identities=17% Similarity=0.238 Sum_probs=259.8
Q ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCC--CEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCC
Q ss_conf 9865468998898679999999998899--29999778786146435682708899999999999841017736377544
Q gi|254781055|r 1 MRYEYDLVVIGAGSSGVRSARLAAQLGK--KVAICEEYRVGGTCVIRGCIPKKLMFYASQYSEYFEDSQGFGWSVDHKSF 78 (461)
Q Consensus 1 M~~~yDvvIIG~GpaG~~aA~~la~~g~--kV~liE~~~~GGtC~~~GCiPsK~l~~~a~~~~~~~~~~~~g~~~~~~~~ 78 (461)
T Consensus 1 M~~~--IVIIG~G~AG~~aa~~lR~~d~~~~Itvi~~e~~~---~Y~rp~Ls~~~~~------------------~---~ 54 (378)
T PRK04965 1 MSNG--IVIIGSGFAARQLVKNIRKQDAHIPITLITADSGD---EYNKPDLSHVFSQ------------------G---Q 54 (378)
T ss_pred CCCC--EEEECCCHHHHHHHHHHHCCCCCCCEEEEECCCCC---CCCCCCCHHHHCC------------------C---C
T ss_conf 9899--99998829999999999711949869999899998---8767816698828------------------9---9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCC-CCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCC
Q ss_conf 99999999999998554668864300332001223-32222222222232211001112322776402332037622112
Q gi|254781055|r 79 DWQSLITAQNKELSRLESFYHNRLESAGVEIFASK-GILSSPHSVYIANLNRTITSRYIVVSTGGSPNRMDFKGSDLCIT 157 (461)
Q Consensus 79 d~~~~~~~~~~~~~~l~~~~~~~l~~~gv~vi~g~-a~~~~~~~v~V~~~~~~i~a~~iiIATGs~p~~p~i~g~~~~~t 157 (461)
T Consensus 55 ~~~~l~~----------~~~~~~~~~~~I~l~~~~~V~~ID~~~k~V~~~g~~~~YDkLVLATGa~p~~ppi~G~~~v~t 124 (378)
T PRK04965 55 RADDLTR----------QSAGEFAEQFNLRLFPHTWVTDIDAEAQVVKSQGNQWQYDKLVLATGASAFVPPVPGRELMLT 124 (378)
T ss_pred CHHHHHC----------CCHHHHHHHCCEEEECCCEEEEECCCCCEEEECCCEEECCEEEEECCCCCCCCCCCCCEEEEE
T ss_conf 9689531----------798999874897998698999984646379958919846879993588755789999647998
Q ss_pred CCCCCCCC------CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEECCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 37851123------33344321234545301124421012210000011112222-223212222222222233233220
Q gi|254781055|r 158 SDEIFSLK------SLPQSTLIIGGGYIAVEFAGILNSLGSKTTLVTRGNSILSK-FDSDIRQGLTDVMISRGMQVFHND 230 (461)
Q Consensus 158 s~~~~~l~------~~P~~i~IiGgG~ig~E~A~~~~~lG~~Vtli~~~~~~l~~-~d~~~~~~~~~~l~~~Gv~i~~~~ 230 (461)
T Consensus 125 lr~l~d~~~~~~~l~~~krvvVIGgG~IG~E~A~~L~~~G~~Vtvve~~~~ll~~~l~~~~~~~l~~~l~~~GV~~~~~~ 204 (378)
T PRK04965 125 LNSQQEYRACETQLRDAQRVLVVGGGLIGTELAMDLCRAGKAVTLVDNAASLLASLMPPEVSSRLQHRLTEMGVHLLLKS 204 (378)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECC
T ss_conf 19999999999775149789998983889999999996798899976667442211789999999999997890999698
Q ss_pred EEEECCCCCCCCEEEEECCCCCCCCCCEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC---
Q ss_conf 00110244576102431275322221000015222001268411232112354334457430000355871254326---
Q gi|254781055|r 231 TIESVVSESGQLKSILKSGKIVKTDQVILAVGRTPRTTGIGLEKVGVKMDENGFIITDCYSRTNVQSIFSLGDISGH--- 307 (461)
Q Consensus 231 ~v~~i~~~~~~~~~~~~~g~~~~~D~vl~a~Gr~Pn~~~l~L~~~gi~~~~~G~i~vd~~~~Ts~~~IyA~GDv~g~--- 307 (461)
T Consensus 205 ~v~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~Gv~Pnt~l--a~~aGl~~~-~G-I~Vd~~l~TS~p~IyA~GDcAe~~g~ 280 (378)
T PRK04965 205 QLQGLEKTESGIRATLDDGRSIEVDAVIAAAGLRPNTAL--ARRAGLAVN-RG-ICVDSYLQTSAPDIYALGDCAEINGQ 280 (378)
T ss_pred EEEEEEECCCEEEEEECCCCEEECCEEEECCCCCCCHHH--HHHCCCCCC-CC-EEECCCCCCCCCCEEEEEEEEEECCE
T ss_conf 899999659989999859979984999989477548278--986698669-98-89999985499999998752898999
Q ss_pred -CCCCCHHHCCCCCCHHHHCCCCCCCCCCCCCCCCEEE-HHHHHHHCCCHHHHHHCCCCEEEEEEEECCCHHHHHCCCCC
Q ss_conf -4310000001111012205887543323333331230-68875516898899854994799998303136687479984
Q gi|254781055|r 308 -IQLTPVAIHAAACFVETVFKDNPTIPDYDLVPTAVFS-KPEIASVGLTEEEAVQKFCRLEIYKTKFFPMKCFLSKRFEH 385 (461)
Q Consensus 308 -~~l~~~A~~~g~~aa~~i~~~~~~~~~~~~ip~~ift-~peiA~VG~te~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~ 385 (461)
T Consensus 281 ~~~~v~p~~~~a~~lA~~l~G~~~~-~~~~~~~~~~K~~~~~i~~~g~~~~~------~~~~-~~----------~~~~~ 342 (378)
T PRK04965 281 VLPFLQPIQLSANALAKNLLGQNTP-LKLPAMLVKVKTPELPLQLAGETQRQ------DLRW-QI----------NAESQ 342 (378)
T ss_pred EEEHHHHHHHHHHHHHHHHCCCCCC-CCCCCCEEEEEECCCCEEECCCCCCC------CCEE-EE----------EECCC
T ss_conf 7502899999999999970799853-10487358985068512864788899------8439-99----------95599
Q ss_pred EEEEEEEECCCCEEEEEEEECCCHHHHHHH
Q ss_conf 079999978998699999981998899999
Q gi|254781055|r 386 TIMKIIVHADNHKVLGVHILGHEASEIIQV 415 (461)
Q Consensus 386 g~~kli~~~~~~~iLG~~~vg~~A~elI~~ 415 (461)
T Consensus 343 g~~~~~~~~-~g~l~G~vl~Gd~~~~~~~l 371 (378)
T PRK04965 343 GMVAKAFDE-AGQLRGFVVSEDRMKEAFPL 371 (378)
T ss_pred CEEEEEECC-CCCEEEEEEECHHHHHHHHH
T ss_conf 808999946-99699999978888877788