HHsearch alignment for GI: 254781055 and conserved domain: PRK05249

Probab=97.54  E-value=0.0004  Score=49.16  Aligned_cols=96  Identities=19%  Similarity=0.274  Sum_probs=58.9

Q ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHH
Q ss_conf             68998898679999999998899299997787861464356827088999999999998410177363775449999999
Q gi|254781055|r    6 DLVVIGAGSSGVRSARLAAQLGKKVAICEEYRVGGTCVIRGCIPKKLMFYASQYSEYFEDSQGFGWSVDHKSFDWQSLIT   85 (461)
Q Consensus         6 DvvIIG~GpaG~~aA~~la~~g~kV~liE~~~~GGtC~~~GCiPsK~l~~~a~~~~~~~~~~~~g~~~~~~~~d~~~~~~   85 (461)
T Consensus       178 ~vvIIGgG~ig~E~A~~~~~lG~~Vtiv~~~~~--------------------l---l------------~~~d~-~~~-  220 (465)
T PRK05249        178 SLIIYGAGVIGCEYASIFRGLGVKVDLINTRDR--------------------L---L------------SFLDD-EIS-  220 (465)
T ss_pred             EEEEECCCCCHHHHHHHHHHHCCEEEEEECCCC--------------------C---H------------HHCCH-HHH-
T ss_conf             599999982179999999960987789721660--------------------0---0------------22189-999-


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCEEECCCCC--CC-CCCCCCCCC-CCCCCEEEEEEEECCCCCEEEEE
Q ss_conf             99999985546688643003320012233--22-222222222-32211001112322776402332
Q gi|254781055|r   86 AQNKELSRLESFYHNRLESAGVEIFASKG--IL-SSPHSVYIA-NLNRTITSRYIVVSTGGSPNRMD  148 (461)
Q Consensus        86 ~~~~~~~~l~~~~~~~l~~~gv~vi~g~a--~~-~~~~~v~V~-~~~~~i~a~~iiIATGs~p~~p~  148 (461)
T Consensus       221 ----------~~l~~~l~~~gI~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~Vl~a~Gr~pn~~~  277 (465)
T PRK05249        221 ----------DALSYHFRNSGVVIRHNEEYEKVEGGDDGVILHLKSGKKIKADCLLYANGRTGNTDG  277 (465)
T ss_pred             ----------HHHHHHHHHCCCEEEECCEEEEEEEECCEEEEEECCCCEEEEEEEEECCCCCCCCCC
T ss_conf             ----------999999998792999798899999608767999479959987089988766667665