HHsearch alignment for GI: 254781055 and conserved domain: PRK09496

Probab=97.41  E-value=0.0042  Score=41.65  Aligned_cols=78  Identities=24%  Similarity=0.387  Sum_probs=46.5

Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEE
Q ss_conf             33344321234545301124421012210000011112222223212222222222233233220001102445761024
Q gi|254781055|r  166 SLPQSTLIIGGGYIAVEFAGILNSLGSKTTLVTRGNSILSKFDSDIRQGLTDVMISRGMQVFHNDTIESVVSESGQLKSI  245 (461)
Q Consensus       166 ~~P~~i~IiGgG~ig~E~A~~~~~lG~~Vtli~~~~~~l~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~  245 (461)
T Consensus       230 ~~~~~v~I~Ggg~ig~~la~~L~~-~~~v~iIe~d~~--------~~~~la~~l~~--~~Vi~GD---------~td~~~  289 (455)
T PRK09496        230 KPVKRIMIAGGGNIGLYLAKLLEK-GYSVKLIERDPE--------RAEELAEELPN--TLVLHGD---------GTDQEL  289 (455)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHC-CCEEEEECCCHH--------HHHHHHHHCCC--CEEEECC---------CCCHHH
T ss_conf             666518998786999999998740-883899708989--------99999974785--3999788---------768899


Q ss_pred             EECCCCCCCCCCEECCCC
Q ss_conf             312753222210000152
Q gi|254781055|r  246 LKSGKIVKTDQVILAVGR  263 (461)
Q Consensus       246 ~~~g~~~~~D~vl~a~Gr  263 (461)
T Consensus       290 L~e~gi~~aD~~ia~T~~  307 (455)
T PRK09496        290 LEEEGIDEADAFIALTND  307 (455)
T ss_pred             HHHHCCCCCCEEEEECCC
T ss_conf             976364556489990388