HHsearch alignment for GI: 254781055 and conserved domain: PRK11749

Probab=98.00  E-value=1.1e-06  Score=67.86  Aligned_cols=90  Identities=19%  Similarity=0.251  Sum_probs=65.0

Q ss_pred             CCCCCCCCCCCCCCHHHHHHHCCCCCCCEECCCCCCCCC---------CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC
Q ss_conf             344321234545301124421012210000011112222---------22321222222222223323322000110244
Q gi|254781055|r  168 PQSTLIIGGGYIAVEFAGILNSLGSKTTLVTRGNSILSK---------FDSDIRQGLTDVMISRGMQVFHNDTIESVVSE  238 (461)
Q Consensus       168 P~~i~IiGgG~ig~E~A~~~~~lG~~Vtli~~~~~~l~~---------~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~  238 (461)
T Consensus       140 gkkVAIIGaGPAGLsAA~~Lar~G~~VtVfE~~~~~GGll~~GIP~~rlpk~v~~~ei~~i~~~GV~~~~n~~vG~d---  216 (460)
T PRK11749        140 GKKVAVIGAGPAGLTAAHRLARKGYDVTIFEARDKAGGLLRYGIPEFRLPKDIVDREVERLLKLGVEIRTNTAVGRD---  216 (460)
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEEECCEEECCC---
T ss_conf             99899989678999999999976984799704787875575458997554479999999998539789855585664---


Q ss_pred             CCCCEEEEECCCCCCCCCCEECCCC-EEE
Q ss_conf             5761024312753222210000152-220
Q gi|254781055|r  239 SGQLKSILKSGKIVKTDQVILAVGR-TPR  266 (461)
Q Consensus       239 ~~~~~~~~~~g~~~~~D~vl~a~Gr-~Pn  266 (461)
T Consensus       217 -----itl~~-L~~~ydAV~lAtGa~~~r  239 (460)
T PRK11749        217 -----ITLDE-LRAEYDAVFIGTGLGLPR  239 (460)
T ss_pred             -----CCHHH-HHHCCCEEEEECCCCCCC
T ss_conf             -----32887-741148899944789886