HHsearch alignment for GI: 254781055 and conserved domain: PRK12778

>PRK12778 putative bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta; Provisional.
Probab=99.96  E-value=6.7e-29  Score=231.10  Aligned_cols=272  Identities=22%  Similarity=0.369  Sum_probs=188.4

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCC-CCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHH-H
Q ss_conf             468998898679999999998899299997787-86146435682708899999999999841017736377544999-9
Q gi|254781055|r    5 YDLVVIGAGSSGVRSARLAAQLGKKVAICEEYR-VGGTCVIRGCIPKKLMFYASQYSEYFEDSQGFGWSVDHKSFDWQ-S   82 (461)
Q Consensus         5 yDvvIIG~GpaG~~aA~~la~~g~kV~liE~~~-~GGtC~~~GCiPsK~l~~~a~~~~~~~~~~~~g~~~~~~~~d~~-~   82 (461)
T Consensus       440 kKVAVIGsGPAGLsaA~~La~~G~~VtVFE~~~~~GG--~L~yGIP~---------------------------fRLPk~  490 (760)
T PRK12778        440 IKVAVIGSGPAGLSFAGDMAKYGYDVTVFEALHEIGG--VLKYGIPE---------------------------FRLPNK  490 (760)
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCC--EEEECCCC---------------------------CCCCHH
T ss_conf             9899989778999999999977990699805888897--57654861---------------------------108789


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC-EEEEEECCCCC--CCCCC
Q ss_conf             9999999998554668864300332001223322222222222322110011123227764-02332037622--11237
Q gi|254781055|r   83 LITAQNKELSRLESFYHNRLESAGVEIFASKGILSSPHSVYIANLNRTITSRYIVVSTGGS-PNRMDFKGSDL--CITSD  159 (461)
Q Consensus        83 ~~~~~~~~~~~l~~~~~~~l~~~gv~vi~g~a~~~~~~~v~V~~~~~~i~a~~iiIATGs~-p~~p~i~g~~~--~~ts~  159 (461)
T Consensus       491 iv~~---eI--------~~l~~lGV~~~~n~--~vG-kdit~~eL~~-egyDAVfla~Ga~~pr~l~IpGe~l~gV~~a~  555 (760)
T PRK12778        491 IVDV---EI--------ENLVKMGVTFEKDC--IVG-KTISVEELEE-EGFKGIFVASGAGLPNFMNIPGENSINIMSSN  555 (760)
T ss_pred             HHHH---HH--------HHHHHCCCEEECCC--EEC-CCCCHHHHHH-CCCCEEEEECCCCCCCCCCCCCCCCCCCEEHH
T ss_conf             9999---99--------99986497998995--778-8689999975-88999999406787752899986677858779


Q ss_pred             CCCC---C-------C----CCCCCCCCCCCCCCCCHHHHHHHCCCCC-CCEECCCCC-CCCCCCCCCCCCCCCCCCCCC
Q ss_conf             8511---2-------3----3334432123454530112442101221-000001111-222222321222222222223
Q gi|254781055|r  160 EIFS---L-------K----SLPQSTLIIGGGYIAVEFAGILNSLGSK-TTLVTRGNS-ILSKFDSDIRQGLTDVMISRG  223 (461)
Q Consensus       160 ~~~~---l-------~----~~P~~i~IiGgG~ig~E~A~~~~~lG~~-Vtli~~~~~-~l~~~d~~~~~~~~~~l~~~G  223 (461)
T Consensus       556 eFL~~vnl~~~~~~~~~~p~~~Gk~VvVIGGGntAmD~artA~RlGAe~V~ivyRR~~~emPA~~~E-----i~~A~eEG  630 (760)
T PRK12778        556 EYLTRVNLMDAASPDSDTPVAFGKNVAVIGGGNTAMDSVRTAKRLGAERAMIIYRRSEEEMPARLEE-----VKHAKEEG  630 (760)
T ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCHHCCCCCHHH-----HHHHHHCC
T ss_conf             9999976443026667874226988999999760999999999839986999703772119999899-----99998579


Q ss_pred             CCCCCCCEEEECCC-CCCCCE------EEE----ECC-----------CCCCCCCCEECCCCEEEECCCCCCCCCCCCCC
Q ss_conf             32332200011024-457610------243----127-----------53222210000152220012684112321123
Q gi|254781055|r  224 MQVFHNDTIESVVS-ESGQLK------SIL----KSG-----------KIVKTDQVILAVGRTPRTTGIGLEKVGVKMDE  281 (461)
Q Consensus       224 v~i~~~~~v~~i~~-~~~~~~------~~~----~~g-----------~~~~~D~vl~a~Gr~Pn~~~l~L~~~gi~~~~  281 (461)
T Consensus       631 V~f~~l~~P~~i~~de~G~v~gv~~~~~elgepD~sGR~~p~~i~gse~~i~aD~VI~AIGq~~~~~~~-~~~~gl~~~~  709 (760)
T PRK12778        631 IEFLTLHNPIEYIADEQGRVKQVILQKMELGEPDASGRRSPVAIPGATETIDIDLAIVSVGVSPNPIVP-SSIPGLELGR  709 (760)
T ss_pred             CEEEECCCCEEEEECCCCEEEEEEEEEEEECCCCCCCCCCCEECCCCEEEEECCEEEECCCCCCCCCCC-CCCCCEEECC
T ss_conf             889916897899977996699999999997553777888735659946999999999998689886521-1366725779


Q ss_pred             CCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHCCCCCCHHHHC
Q ss_conf             543344574300003558712543264310000001111012205
Q gi|254781055|r  282 NGFIITDCYSRTNVQSIFSLGDISGHIQLTPVAIHAAACFVETVF  326 (461)
Q Consensus       282 ~G~i~vd~~~~Ts~~~IyA~GDv~g~~~l~~~A~~~g~~aa~~i~  326 (461)
T Consensus       710 ~G~i~vd~~~~Ts~~gVFAgGD~v~G~~tVV~Ai~~Gr~AA~~Id  754 (760)
T PRK12778        710 KGTIAVDDNMQSSIPGIYAGGDIVRGGATVILAMGDGRRAAAAMN  754 (760)
T ss_pred             CCCEEECCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             997883989634898999867867680599999999999999999