HHsearch alignment for GI: 254781055 and conserved domain: PRK12809
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed.
Probab=99.96 E-value=2e-29 Score=234.93 Aligned_cols=271 Identities=20% Similarity=0.349 Sum_probs=189.9
Q ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEECC-CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHH-HH
Q ss_conf 6899889867999999999889929999778-786146435682708899999999999841017736377544999-99
Q gi|254781055|r 6 DLVVIGAGSSGVRSARLAAQLGKKVAICEEY-RVGGTCVIRGCIPKKLMFYASQYSEYFEDSQGFGWSVDHKSFDWQ-SL 83 (461)
Q Consensus 6 DvvIIG~GpaG~~aA~~la~~g~kV~liE~~-~~GGtC~~~GCiPsK~l~~~a~~~~~~~~~~~~g~~~~~~~~d~~-~~ 83 (461)
T Consensus 312 KVAVIGsGPAGLaaA~~Lar~G~~VTVfE~~~~~GGl-L~yG-IP---------------------------~fRLPK~v 362 (639)
T PRK12809 312 KVAVIGAGPAGLGCADILARAGVQVDVFDRHPEIGGM-LTFG-IP---------------------------PFKLDKTV 362 (639)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCE-EEEC-CC---------------------------CCCCCHHH
T ss_conf 8999897589999999999759906999368888986-8535-87---------------------------45277789
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC-CEEEEEECCCCC--CCCCCC
Q ss_conf 99999999855466886430033200122332222222222232211001112322776-402332037622--112378
Q gi|254781055|r 84 ITAQNKELSRLESFYHNRLESAGVEIFASKGILSSPHSVYIANLNRTITSRYIVVSTGG-SPNRMDFKGSDL--CITSDE 160 (461)
Q Consensus 84 ~~~~~~~~~~l~~~~~~~l~~~gv~vi~g~a~~~~~~~v~V~~~~~~i~a~~iiIATGs-~p~~p~i~g~~~--~~ts~~ 160 (461)
T Consensus 363 v~re---i--------~~l~~lGV~f~~n~~--VG-kDit~~eL~~--~yDAVflg~Ga~~~~~l~IpGedl~GV~~Ale 426 (639)
T PRK12809 363 LSQR---R--------EIFTAMGIDFHLNCE--IG-RDITFSDLTS--EYDAVFIGVGTYGMMRADLPHEDAPGVIQALP 426 (639)
T ss_pred HHHH---H--------HHHHHCCCEEEECCE--EC-CCCCHHHHHH--HCCEEEEEECCCCCCCCCCCCCCCCCCEEHHH
T ss_conf 9999---9--------999864988991967--79-8688999973--17989997367888548988777878387699
Q ss_pred CC--------CC---CCC------CCCCCCCCCCCCCCHHHHHHHCCC-CCCCEECCCCCC-CCCCCCCCCCCCCCCCCC
Q ss_conf 51--------12---333------344321234545301124421012-210000011112-222223212222222222
Q gi|254781055|r 161 IF--------SL---KSL------PQSTLIIGGGYIAVEFAGILNSLG-SKTTLVTRGNSI-LSKFDSDIRQGLTDVMIS 221 (461)
Q Consensus 161 ~~--------~l---~~~------P~~i~IiGgG~ig~E~A~~~~~lG-~~Vtli~~~~~~-l~~~d~~~~~~~~~~l~~ 221 (461)
T Consensus 427 fL~~~~~~~~g~~~~~~~p~~~~~GK~VVVIGGGntAmDcaRTA~RlGA~~VtivYRR~~~eMPA~~~Ev-----~~A~E 501 (639)
T PRK12809 427 FLTAHTRQLMGLPESEEYPLTDVEGKRVVVLGGGDTTMDCLRTSIRLNAASVTCAYRRDEVSMPGSRKEV-----VNARE 501 (639)
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEC-----CCHHH
T ss_conf 9999998643886444577545567779998998218999999998399877521547745799970030-----10121
Q ss_pred CCCCCCCCCEEEECCC-CCCCCEE------EE----ECC-----------CCCCCCCCEECCCCEEEECCCCCCCCCCCC
Q ss_conf 2332332200011024-4576102------43----127-----------532222100001522200126841123211
Q gi|254781055|r 222 RGMQVFHNDTIESVVS-ESGQLKS------IL----KSG-----------KIVKTDQVILAVGRTPRTTGIGLEKVGVKM 279 (461)
Q Consensus 222 ~Gv~i~~~~~v~~i~~-~~~~~~~------~~----~~g-----------~~~~~D~vl~a~Gr~Pn~~~l~L~~~gi~~ 279 (461)
T Consensus 502 EGV~f~~~~~P~~i~~de~G~V~gv~~vr~~lgepd~~GRr~p~~i~Gse~~i~aD~VI~AiG~~~~~~~-~~~~~giel 580 (639)
T PRK12809 502 EGVEFQFNVQPQYIACDEDGRLTAVGLIRTAMGEPGPDGRRRPRPVAGSEFELPADVLIMAFGFQAHAMP-WLQGSGIKL 580 (639)
T ss_pred CCEEEECCCCCEEEEECCCCEEEEEEEEEEEECCCCCCCCEEEEEECCCEEEEECCEEEECCCCCCCCCC-CCCCCCEEE
T ss_conf 8738982788579996798639999999999567588888734760893699989999998878998875-334678558
Q ss_pred CCCCCCCCCCC----CCCCEEEEEEECCCCCCCCCCCHHHCCCCCCHHHHCC
Q ss_conf 23543344574----3000035587125432643100000011110122058
Q gi|254781055|r 280 DENGFIITDCY----SRTNVQSIFSLGDISGHIQLTPVAIHAAACFVETVFK 327 (461)
Q Consensus 280 ~~~G~i~vd~~----~~Ts~~~IyA~GDv~g~~~l~~~A~~~g~~aa~~i~~ 327 (461)
T Consensus 581 ~~~G~I~~~~~~~~~~qTs~~gVFAgGD~v~G~stVV~AI~~Gr~AA~sI~~ 632 (639)
T PRK12809 581 DKWGLIQTGDVGYLPTQTHLKKVFAGGDAVHGADLVVTAMAAGRQAARDMLT 632 (639)
T ss_pred CCCCCEECCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 8999886178777676689999998278786736999999999999999999