HHsearch alignment for GI: 254781055 and conserved domain: PRK12810
>PRK12810 gltD glutamate synthase subunit beta; Reviewed.
Probab=99.97 E-value=6.4e-31 Score=245.90 Aligned_cols=276 Identities=21% Similarity=0.309 Sum_probs=189.3
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCC-CCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHH
Q ss_conf 5468998898679999999998899299997787-861464356827088999999999998410177363775449999
Q gi|254781055|r 4 EYDLVVIGAGSSGVRSARLAAQLGKKVAICEEYR-VGGTCVIRGCIPKKLMFYASQYSEYFEDSQGFGWSVDHKSFDWQS 82 (461)
Q Consensus 4 ~yDvvIIG~GpaG~~aA~~la~~g~kV~liE~~~-~GGtC~~~GCiPsK~l~~~a~~~~~~~~~~~~g~~~~~~~~d~~~ 82 (461)
T Consensus 143 gkkVAVIGsGPAGLsaA~~Lar~G~~VtVfE~~~~~GG--ll~yGIP~~-------------------------RLp-k~ 194 (472)
T PRK12810 143 GKKVAVVGSGPAGLAAADQLARAGHKVTVFERDDRIGG--LLRYGIPDF-------------------------KLE-KD 194 (472)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCC--EEEECCCCC-------------------------CCC-HH
T ss_conf 99899989778999999999866975899725777775--465317885-------------------------553-58
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC-CEEEEEECCCCC--CCCCC
Q ss_conf 999999999855466886430033200122332222222222232211001112322776-402332037622--11237
Q gi|254781055|r 83 LITAQNKELSRLESFYHNRLESAGVEIFASKGILSSPHSVYIANLNRTITSRYIVVSTGG-SPNRMDFKGSDL--CITSD 159 (461)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~~l~~~gv~vi~g~a~~~~~~~v~V~~~~~~i~a~~iiIATGs-~p~~p~i~g~~~--~~ts~ 159 (461)
T Consensus 195 v~~~e---i--------~~l~~~GV~~~~n~~--VG-~dit~~~L~--~~yDAV~la~Ga~~~r~l~ipG~~~~GV~~A~ 258 (472)
T PRK12810 195 VIDRR---I--------ELMEGEGIEFRTGVE--VG-KDITAEQLL--AEYDAVFLGGGAYKPRDLGIPGRDLDGVHFAM 258 (472)
T ss_pred HHHHH---H--------HHHHHCCCEEEECEE--CC-CCCCHHHHH--CCCCEEEEECCCCCCCCCCCCCCCCCCEEEHH
T ss_conf 99999---9--------999857978990523--18-757699985--05798999037787852787776678858869
Q ss_pred CCCC---------C-----CCCCCCCCCCCCCCCCCHHHHHHHCCCC-CCCEECCCCCCCCCCCCCCCCCC--------C
Q ss_conf 8511---------2-----3333443212345453011244210122-10000011112222223212222--------2
Q gi|254781055|r 160 EIFS---------L-----KSLPQSTLIIGGGYIAVEFAGILNSLGS-KTTLVTRGNSILSKFDSDIRQGL--------T 216 (461)
Q Consensus 160 ~~~~---------l-----~~~P~~i~IiGgG~ig~E~A~~~~~lG~-~Vtli~~~~~~l~~~d~~~~~~~--------~ 216 (461)
T Consensus 259 dfL~~~~~~~~~~~~~~~~~~~Gk~VvVIGGGntAmD~arta~R~GA~~V~rr~~~~--mp~~~~~~~~~~~~~~~~~ev 336 (472)
T PRK12810 259 DFLIQNTRVLGGEKDEPFILAKGKHVVVIGGGDTGMDCVGTSIRQGAKSVTQRDIMP--MPPSRRNKNNPWPYWPMKFEV 336 (472)
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECC--CCCCCCCCCCCHHHHHHHHHH
T ss_conf 999999875337876666322476589989866899999999973896899975114--881323323723233468889
Q ss_pred CCCCCCCCCCCCCCEEEECCCCCCCCEE------EEE-----------CCCCCCCCCCEECCCCEEEECCCCCCCCCCCC
Q ss_conf 2222223323322000110244576102------431-----------27532222100001522200126841123211
Q gi|254781055|r 217 DVMISRGMQVFHNDTIESVVSESGQLKS------ILK-----------SGKIVKTDQVILAVGRTPRTTGIGLEKVGVKM 279 (461)
Q Consensus 217 ~~l~~~Gv~i~~~~~v~~i~~~~~~~~~------~~~-----------~g~~~~~D~vl~a~Gr~Pn~~~l~L~~~gi~~ 279 (461)
T Consensus 337 ~~A~eEGv~~~~~~~p~~i~~~~g~v~gv~~~~~~~~~g~~~~~~~~g~e~~i~aD~VI~AiGq~~~~~~~-~~~~gl~~ 415 (472)
T PRK12810 337 SNAHEEGVEREFNVQTKEFEGENGKVTGVKVVETELGKGRRKFEPVPGSEFVLPADLVLLAMGFTGPEPEW-LAQFGVEL 415 (472)
T ss_pred HHHHHCCCCEEECCCCEEEEECCCEEEEEEEEEEEECCCCCCEEECCCCEEEEECCEEEECCCCCCCCCCC-CCCCCCEE
T ss_conf 99997488257335736998149869999999977617887625669954999899999988888886322-22568028
Q ss_pred CCCCCCCCCC-CCCCCEEEEEEECCCCCCCCCCCHHHCCCCCCHHHHC
Q ss_conf 2354334457-4300003558712543264310000001111012205
Q gi|254781055|r 280 DENGFIITDC-YSRTNVQSIFSLGDISGHIQLTPVAIHAAACFVETVF 326 (461)
Q Consensus 280 ~~~G~i~vd~-~~~Ts~~~IyA~GDv~g~~~l~~~A~~~g~~aa~~i~ 326 (461)
T Consensus 416 d~~G~i~vd~~~~~Ts~~gVFA~GD~~~G~~~vv~Ai~~Gr~AA~~I~ 463 (472)
T PRK12810 416 DERGRVAADEGAYQTSNPKVFAAGDMRRGQSLVVWAIAEGRQAARAID 463 (472)
T ss_pred CCCCCEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 799988868998745999999836877781699999999999999999