HHsearch alignment for GI: 254781055 and conserved domain: PRK12814

>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional.
Probab=99.96  E-value=1.4e-29  Score=236.16  Aligned_cols=268  Identities=22%  Similarity=0.370  Sum_probs=190.8

Q ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEECCC-CCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHH-HH
Q ss_conf             68998898679999999998899299997787-86146435682708899999999999841017736377544999-99
Q gi|254781055|r    6 DLVVIGAGSSGVRSARLAAQLGKKVAICEEYR-VGGTCVIRGCIPKKLMFYASQYSEYFEDSQGFGWSVDHKSFDWQ-SL   83 (461)
Q Consensus         6 DvvIIG~GpaG~~aA~~la~~g~kV~liE~~~-~GGtC~~~GCiPsK~l~~~a~~~~~~~~~~~~g~~~~~~~~d~~-~~   83 (461)
T Consensus       195 kVAIIGaGPAGLsaAy~L~~~Gh~VTVfE~~~~~GGm-lryG-IP---------------------------~yRLPk~v  245 (652)
T PRK12814        195 KVAIIGAGPAGLTAAYYLLRKGHDVTIFDANEQAGGM-MRYG-IP---------------------------RFRLPESV  245 (652)
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCE-EEEC-CC---------------------------CCCCCHHH
T ss_conf             7999683789999999999779906998158888986-7644-86---------------------------33389999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC-EEEEEECCCCC--CCCCCC
Q ss_conf             999999998554668864300332001223322222222222322110011123227764-02332037622--112378
Q gi|254781055|r   84 ITAQNKELSRLESFYHNRLESAGVEIFASKGILSSPHSVYIANLNRTITSRYIVVSTGGS-PNRMDFKGSDL--CITSDE  160 (461)
Q Consensus        84 ~~~~~~~~~~l~~~~~~~l~~~gv~vi~g~a~~~~~~~v~V~~~~~~i~a~~iiIATGs~-p~~p~i~g~~~--~~ts~~  160 (461)
T Consensus       246 ld---~EI~--------~i~~~GV~~~~n~~-v-G-~ditl~~L~~--~yDAVflaiGa~~~r~L~ipGedl~gV~~avd  309 (652)
T PRK12814        246 ID---ADIA--------PLRAMGAEFRFNTV-F-G-RDITLEELQK--EFDAVLLAVGAQKASKMGIPGEELPGVISGID  309 (652)
T ss_pred             HH---HHHH--------HHHHCCCEEEEEEE-E-C-CCCCHHHHHH--HCCEEEEEECCCCCCCCCCCCCCCCCEEEHHH
T ss_conf             99---9999--------99971985886679-4-7-7477999986--58999997557877447988887877276899


Q ss_pred             CC------CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC-CCEECCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf             51------1233334432123454530112442101221-000001111-222222321222222222223323322000
Q gi|254781055|r  161 IF------SLKSLPQSTLIIGGGYIAVEFAGILNSLGSK-TTLVTRGNS-ILSKFDSDIRQGLTDVMISRGMQVFHNDTI  232 (461)
Q Consensus       161 ~~------~l~~~P~~i~IiGgG~ig~E~A~~~~~lG~~-Vtli~~~~~-~l~~~d~~~~~~~~~~l~~~Gv~i~~~~~v  232 (461)
T Consensus       310 fL~~v~~g~~~~~GkkVvVIGGGNtAmD~ARTA~RlGA~~VtivyRRt~~eMpA~~~Ei~-----eA~eEGV~~~~l~~P  384 (652)
T PRK12814        310 FLRNVALGTALHPGKKVVVIGGGNTAIDAARTALRLGAESVTILYRRTREEMPANRAEIE-----EALAEGVSLRELAAP  384 (652)
T ss_pred             HHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCEEEEEECCCHHCCCCCHHHHH-----HHHHCCCCEEECCCC
T ss_conf             999852698666788524866881389999999874897589983376331999867777-----888679846976155


Q ss_pred             EECCCCCCCCEEEE---------ECC-----------CCCCCCCCEECCCCEEEECCCCCCCCCCCCCCCCCCCCC-CCC
Q ss_conf             11024457610243---------127-----------532222100001522200126841123211235433445-743
Q gi|254781055|r  233 ESVVSESGQLKSIL---------KSG-----------KIVKTDQVILAVGRTPRTTGIGLEKVGVKMDENGFIITD-CYS  291 (461)
Q Consensus       233 ~~i~~~~~~~~~~~---------~~g-----------~~~~~D~vl~a~Gr~Pn~~~l~L~~~gi~~~~~G~i~vd-~~~  291 (461)
T Consensus       385 ~~i~~~~g~~~~~~~~~~~ge~D~sGR~~pv~v~gse~~i~aD~VI~AIGQ~~d~~~--~~~~gl~~~~~G~i~vd~~t~  462 (652)
T PRK12814        385 VSIERSEGGLELTAIKMQQGEPDESGRRRPVPVEGSEFTLQADTVISAIGQQVDPPI--AEAAGIGTSRNGTVKVDPETL  462 (652)
T ss_pred             EEEEEECCCEEEEEEEEEEEEECCCCCEEEEECCCCEEEEECCEEEECCCCCCCCCH--HHCCCCCCCCCCCEEECCCCC
T ss_conf             899986896899999999968878897724565996699617889984587888332--224586366899888588887


Q ss_pred             CCCEEEEEEECCCCCCCCCCCHHHCCCCCCHHHH
Q ss_conf             0000355871254326431000000111101220
Q gi|254781055|r  292 RTNVQSIFSLGDISGHIQLTPVAIHAAACFVETV  325 (461)
Q Consensus       292 ~Ts~~~IyA~GDv~g~~~l~~~A~~~g~~aa~~i  325 (461)
T Consensus       463 ~Ts~~gVFAgGD~v~Gp~tvV~AIa~Gr~AA~~I  496 (652)
T PRK12814        463 QTSVAGVFAGGDCVTGADIAINAVEQGKRAAHAI  496 (652)
T ss_pred             CCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             4399999989888768449999999999999999