HHsearch alignment for GI: 254781055 and conserved domain: TIGR01316
>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric; InterPro: IPR006004 One pathway for the assimilation of ammonia and glutamate biosynthesis involves homotetrameric glutamate synthase (1.4.1.13 from EC) which transfers the amide group of glutamine to 2-oxoglutarate to yield two molecules of glutamate . 2 L-glutamate + NADP^+ = L-glutamine + 2-oxoglutarate + NADPH + H^+. .
Probab=97.72 E-value=7.5e-06 Score=61.86 Aligned_cols=90 Identities=16% Similarity=0.203 Sum_probs=70.0
Q ss_pred CCCCCCCCCCCCCHHHHHHHCCCCCCCEECCCCCCC-------C--CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC
Q ss_conf 443212345453011244210122100000111122-------2--2223212222222222233233220001102445
Q gi|254781055|r 169 QSTLIIGGGYIAVEFAGILNSLGSKTTLVTRGNSIL-------S--KFDSDIRQGLTDVMISRGMQVFHNDTIESVVSES 239 (461)
Q Consensus 169 ~~i~IiGgG~ig~E~A~~~~~lG~~Vtli~~~~~~l-------~--~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~ 239 (461)
T Consensus 143 ~kVAViGaGPAGL~cA~elAk~Gh~VtvfEALhKPGGV~~YGIPefRLpKei~~~E~k~LkklGv~fr~~~lvGk----- 217 (462)
T TIGR01316 143 KKVAVIGAGPAGLACASELAKKGHEVTVFEALHKPGGVLAYGIPEFRLPKEIVETEVKKLKKLGVKFRTDYLVGK----- 217 (462)
T ss_pred CEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEECCEECC-----
T ss_conf 779998468214688999974798699997148998567536888548757889888876326637994437505-----
Q ss_pred CCCEEEEECC-CCCCCCCCEECCCC-EEE
Q ss_conf 7610243127-53222210000152-220
Q gi|254781055|r 240 GQLKSILKSG-KIVKTDQVILAVGR-TPR 266 (461)
Q Consensus 240 ~~~~~~~~~g-~~~~~D~vl~a~Gr-~Pn 266 (461)
T Consensus 218 ---t~TL~eL~~~YGfDAVFIgtGAG~pk 243 (462)
T TIGR01316 218 ---TVTLEELLEKYGFDAVFIGTGAGLPK 243 (462)
T ss_pred ---CHHHHHHHHHCCCCEEEEEECCCCCE
T ss_conf ---11288888751970799950689870