HHsearch alignment for GI: 254781055 and conserved domain: TIGR01320
>TIGR01320 mal_quin_oxido malate:quinone-oxidoreductase; InterPro: IPR006231 The membrane-associated enzyme, malate:quinone-oxidoreductase, is an alternative to the better-known NAD-dependent malate dehydrogenase as part of the TCA cycle. The reduction of a quinone rather than NAD+ makes the reaction essentially irreversible in the direction of malate oxidation to oxaloacetate. Both forms of malate dehydrogenase are active in E. coli; disruption of this form causes less phenotypic change. In some bacteria, this form is the only or the more important malate dehydrogenase . ; GO: 0008924 malate dehydrogenase (acceptor) activity, 0006099 tricarboxylic acid cycle.
Probab=96.31 E-value=0.0087 Score=39.33 Aligned_cols=258 Identities=17% Similarity=0.275 Sum_probs=124.9
Q ss_pred CCEEEECCCHHHHHHHHHHHHC--CCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHH
Q ss_conf 4689988986799999999988--99299997787861464356827088999999999998410177363775449999
Q gi|254781055|r 5 YDLVVIGAGSSGVRSARLAAQL--GKKVAICEEYRVGGTCVIRGCIPKKLMFYASQYSEYFEDSQGFGWSVDHKSFDWQS 82 (461)
Q Consensus 5 yDvvIIG~GpaG~~aA~~la~~--g~kV~liE~~~~GGtC~~~GCiPsK~l~~~a~~~~~~~~~~~~g~~~~~~~~d~~~ 82 (461)
T Consensus 1 ~DvvLvGAGIMSATLGvLLk~LeP~w~~~l~Erld~-------~A~ESS~pWNNAGTGHSALCELNYtP~~~dG~idi~k 73 (487)
T TIGR01320 1 TDVVLVGAGIMSATLGVLLKELEPSWEITLIERLDA-------VALESSNPWNNAGTGHSALCELNYTPEVADGSIDIAK 73 (487)
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCCEEEEEEEECC-------CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHH
T ss_conf 967886561668999999973099953899986077-------4546676600112013687642247887678265355
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCC--------CCCCCCC--CEEEEEEEECCCCCEEEEEECCC
Q ss_conf 9999999998554668864300332001223322222222--------2223221--10011123227764023320376
Q gi|254781055|r 83 LITAQNKELSRLESFYHNRLESAGVEIFASKGILSSPHSV--------YIANLNR--TITSRYIVVSTGGSPNRMDFKGS 152 (461)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~~l~~~gv~vi~g~a~~~~~~~v--------~V~~~~~--~i~a~~iiIATGs~p~~p~i~g~ 152 (461)
T Consensus 74 Av~ine-~F~VsrQFWa~lv~---------~G~L~dp~~FiNpVPH~Sfv~G~~~v~YLk~Ry~AL~-----~~~lF~~m 138 (487)
T TIGR01320 74 AVGINE-QFQVSRQFWAHLVE---------EGVLEDPKSFINPVPHVSFVRGSDGVAYLKKRYEALK-----KHPLFEGM 138 (487)
T ss_pred HCCCCC-CCEECHHHHHHHHH---------CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH-----CCCCCCCC
T ss_conf 622011-41131888989983---------6724685402278885202657066799999999861-----78431375
Q ss_pred CCCCCCCCC-----CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCC-CCCC
Q ss_conf 221123785-----1123333443212345453011244210122100000111122222232122222222222-3323
Q gi|254781055|r 153 DLCITSDEI-----FSLKSLPQSTLIIGGGYIAVEFAGILNSLGSKTTLVTRGNSILSKFDSDIRQGLTDVMISR-GMQV 226 (461)
Q Consensus 153 ~~~~ts~~~-----~~l~~~P~~i~IiGgG~ig~E~A~~~~~lG~~Vtli~~~~~~l~~~d~~~~~~~~~~l~~~-Gv~i 226 (461)
T Consensus 139 ~y~~d~~~~a~~lPLM~~gR~~~------~pv----A~~~~~~GTDvdF------------Galt~Ql~~~~~~~PG~~~ 196 (487)
T TIGR01320 139 EYSEDKATFAEWLPLMAKGRDFS------EPV----AANWVAEGTDVDF------------GALTKQLLKYLEQEPGTKI 196 (487)
T ss_pred CEECCHHHHHHHCCCCCCCCCCC------CHH----HHHHHCCCCEECH------------HHHHHHHHHHHHCCCCCEE
T ss_conf 00058689987425456876886------343----3212047840027------------7899999999702898167
Q ss_pred CCCCEEEECCCCC-CCCEEEEEC----C--CCCCCCCCEECCCCEEEECCCCCCCCCCCCCC--CCCCCCCCCCCCCEEE
Q ss_conf 3220001102445-761024312----7--53222210000152220012684112321123--5433445743000035
Q gi|254781055|r 227 FHNDTIESVVSES-GQLKSILKS----G--KIVKTDQVILAVGRTPRTTGIGLEKVGVKMDE--NGFIITDCYSRTNVQS 297 (461)
Q Consensus 227 ~~~~~v~~i~~~~-~~~~~~~~~----g--~~~~~D~vl~a~Gr~Pn~~~l~L~~~gi~~~~--~G~i~vd~~~~Ts~~~ 297 (461)
T Consensus 197 ~yg~~V~~l~r~sD~~W~vt~~d~r~PG~~~~l~a~FvFlGAGG~A--L~l-Lq~SGIpevKGFaGFPvSG~fLR~~Npe 273 (487)
T TIGR01320 197 RYGHEVKDLKRESDGAWVVTVKDTRTPGGKRTLKARFVFLGAGGGA--LPL-LQKSGIPEVKGFAGFPVSGLFLRCSNPE 273 (487)
T ss_pred ECCCCEEHHHHCCCCCCEEEECCCCCCCCCEEEEEEEEEEECCCCH--HHH-HHHCCCCCCCCCCCCCCCCEECCCCCHH
T ss_conf 6385000110105885378841220888762676677897157416--889-8866798766533657555000178879
Q ss_pred --------EEEECCCCCCCCC
Q ss_conf --------5871254326431
Q gi|254781055|r 298 --------IFSLGDISGHIQL 310 (461)
Q Consensus 298 --------IyA~GDv~g~~~l 310 (461)
T Consensus 274 ~~~qH~AKVYG~A~v-GAPPm 293 (487)
T TIGR01320 274 LVEQHRAKVYGQASV-GAPPM 293 (487)
T ss_pred HHHHHCCCCCCCCCC-CCCCC
T ss_conf 998505621577887-64888