HHsearch alignment for GI: 254781055 and conserved domain: TIGR01350
>TIGR01350 lipoamide_DH dihydrolipoamide dehydrogenase; InterPro: IPR006258 These sequences represent dihydrolipoamide dehydrogenase, a flavoprotein that acts in a number of ways. It is the E3 component of dehydrogenase complexes for pyruvate, 2-oxoglutarate, 2-oxoisovalerate, and acetoin. It can also serve as the L protein of the glycine cleavage system. This family includes a few members known to have distinct functions (ferric leghemoglobin reductase and NADH:ferredoxin oxidoreductase) but that may be predicted by homology to act as dihydrolipoamide dehydrogenase as well. The motif GGXCXXXGCXP near the N-terminus contains a redox-active disulphide. ; GO: 0004148 dihydrolipoyl dehydrogenase activity, 0050660 FAD binding, 0006118 electron transport.
Probab=97.84 E-value=7.1e-05 Score=54.68 Aligned_cols=135 Identities=21% Similarity=0.319 Sum_probs=80.2
Q ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEECCC-CCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHH
Q ss_conf 8998898679999999998899299997787-861464356827088999999999998410177363775449999999
Q gi|254781055|r 7 LVVIGAGSSGVRSARLAAQLGKKVAICEEYR-VGGTCVIRGCIPKKLMFYASQYSEYFEDSQGFGWSVDHKSFDWQSLIT 85 (461)
Q Consensus 7 vvIIG~GpaG~~aA~~la~~g~kV~liE~~~-~GGtC~~~GCiPsK~l~~~a~~~~~~~~~~~~g~~~~~~~~d~~~~~~ 85 (461)
T Consensus 181 lvIiGGGVIG~EfA~~f~~lG~~VTv~E~~drI----------------------------------L--p~~------- 217 (481)
T TIGR01350 181 LVIIGGGVIGVEFASIFASLGVKVTVIEMLDRI----------------------------------L--PGE------- 217 (481)
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC----------------------------------C--CCC-------
T ss_conf 699878667788999998539808999457500----------------------------------3--543-------
Q ss_pred HHHHHHHHHHHHHHHHHCCCC-EEECCCCCC-----CCCCCCCC--CCCCC----CCEEEEEEEECCCCCEEEE--EECC
Q ss_conf 999999855466886430033-200122332-----22222222--22322----1100111232277640233--2037
Q gi|254781055|r 86 AQNKELSRLESFYHNRLESAG-VEIFASKGI-----LSSPHSVY--IANLN----RTITSRYIVVSTGGSPNRM--DFKG 151 (461)
Q Consensus 86 ~~~~~~~~l~~~~~~~l~~~g-v~vi~g~a~-----~~~~~~v~--V~~~~----~~i~a~~iiIATGs~p~~p--~i~g 151 (461)
T Consensus 218 --D~ev---Sk~~~~~L~~~GNv~i~~~~~V~~~~~~~~~~~v~~~~~~~g~ge~~~~~~e~vLvavGR~pn~~~~GLe~ 292 (481)
T TIGR01350 218 --DAEV---SKVVKKKLKKKGNVKILTNAKVTGAAVEKNDDQVVVEVELEGKGEVETLTAEKVLVAVGRKPNTEGLGLEK 292 (481)
T ss_pred --CHHH---HHHHHHHHHHCCCEEEECCCEEECCEEEECCCEEEEEEEECCCCCEEEEEEEEEEEEECCCCCCCCCCEEE
T ss_conf --1689---99999999744984985485442335775287899999987998058898739999842434767646021
Q ss_pred CCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCHHHHHHHC
Q ss_conf 622112378511----23333443212345453011244210
Q gi|254781055|r 152 SDLCITSDEIFS----LKSLPQSTLIIGGGYIAVEFAGILNS 189 (461)
Q Consensus 152 ~~~~~ts~~~~~----l~~~P~~i~IiGgG~ig~E~A~~~~~ 189 (461)
T Consensus 293 ~Gv~~~~rG~i~vd~~~~Tnv~~IYAIGDv~gg~mLAH~A~~ 334 (481)
T TIGR01350 293 LGVKLDERGRIVVDEYMRTNVPGIYAIGDVIGGPMLAHVASH 334 (481)
T ss_pred EEEEECCCCEEEECCEEEECCCCEEEEEECCCCCHHHHHHHH
T ss_conf 211887898188798325168966688734787026899998