>TIGR01377 soxA_mon sarcosine oxidase, monomeric form; InterPro: IPR006281 This set of sequences describe the alpha subunit of a family of known and putative heterotetrameric sarcosine oxidases. Five operons of such oxidases are found in Mesorhizobium loti and three in Agrobacterium tumefaciens, a high enough copy number to suggest that not all members share the same function. Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate . Bacterial sarcosine oxidases have been isolated from over a dozen different organisms and fall into two major classes (1) monomeric form that contains only covalent flavin and (2) heterotetrameric (alpha, beta, gamma, delta) form that contain a covalent and noncovalent flavin, this entry represents the monomeric form.; GO: 0008115 sarcosine oxidase activity, 0046653 tetrahydrofolate metabolic process.

Probab=97.31 E-value=0.0003 Score=50.10 Aligned_cols=211 Identities=20% Similarity=0.383 Sum_probs=102.5 Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHH--HHHHHHHHCCCEECCCCCCCHHH Q ss_conf 4689988986799999999988992999977878614643568270889999999--99998410177363775449999 Q gi|254781055|r 5 YDLVVIGAGSSGVRSARLAAQLGKKVAICEEYRVGGTCVIRGCIPKKLMFYASQY--SEYFEDSQGFGWSVDHKSFDWQS 82 (461) Q Consensus 5 yDvvIIG~GpaG~~aA~~la~~g~kV~liE~~~~GGtC~~~GCiPsK~l~~~a~~--~~~~~~~~~~g~~~~~~~~d~~~ 82 (461) T Consensus 1 fDvIVvGAG~~G~~aaY~LAK~~~~~LLleqFd~p---H~rG----------SsHG~sRiIR~--aY~Ed----r~-Y~~ 60 (401) T TIGR01377 1 FDVIVVGAGIMGCFAAYHLAKRGKKTLLLEQFDLP---HSRG----------SSHGQSRIIRK--AYPED----RF-YTS 60 (401) T ss_pred CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC---CCCC----------CCCCCCCCEEC--CCCCC----HH-HHH T ss_conf 95799817613568999987538617887515677---6788----------87877100010--26786----35-788 Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCC-CCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCC-CCCCCCC Q ss_conf 99999999985546688643003320012233222-222222223221100111232277640233203762-2112378 Q gi|254781055|r 83 LITAQNKELSRLESFYHNRLESAGVEIFASKGILS-SPHSVYIANLNRTITSRYIVVSTGGSPNRMDFKGSD-LCITSDE 160 (461) Q Consensus 83 ~~~~~~~~~~~l~~~~~~~l~~~gv~vi~g~a~~~-~~~~v~V~~~~~~i~a~~iiIATGs~p~~p~i~g~~-~~~ts~~ 160 (461) T Consensus 61 m~~e~~~lWa~le-------~E~g~k~h~qT~~l~~G~k~-----~s~~l~---~~~a~~~------~~~l~H~~~~s~~ 119 (401) T TIGR01377 61 MVSECYQLWAQLE-------KEAGTKLHRQTGLLLLGPKE-----NSQSLK---TIVATLS------RHGLEHELLSSKQ 119 (401) T ss_pred HHHHHHHHHHHHH-------HCCCCEEECCCCEEEECCCC-----CCHHHH---HHHHHHH------HCCCCEEEECCHH T ss_conf 9999999999986-------21472643134515631577-----860589---9999886------2552303316412 Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC-- Q ss_conf 511233334432123454530112442101221000001111222222321222222222223323322000110244-- Q gi|254781055|r 161 IFSLKSLPQSTLIIGGGYIAVEFAGILNSLGSKTTLVTRGNSILSKFDSDIRQGLTDVMISRGMQVFHNDTIESVVSE-- 238 (461) Q Consensus 161 ~~~l~~~P~~i~IiGgG~ig~E~A~~~~~lG~~Vtli~~~~~~l~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~-- 238 (461) T Consensus 120 l~--~rf~G~i~~p-~---------------n~~g~~~~~gGvl~--~~ka~~a~q~l~~~~Ga~v~d~~kV~~i~~~Ge 179 (401) T TIGR01377 120 LK--QRFPGNIRVP-R---------------NEVGLLDELGGVLY--AEKALRALQELAEAHGAIVRDGTKVVEIKPDGE 179 (401) T ss_pred HH--HCCCCCEECC-C---------------CEEEEEECCCCEEC--HHHHHHHHHHHHHHCCCEEECCCEEEEEEECCC T ss_conf 32--0047623406-8---------------60788746887462--278999999999874968734860366542676 Q ss_pred CCC-CEEEEECCCCCCCCCCEECCCCEEEE-CCCCCCCCC-CCC Q ss_conf 576-10243127532222100001522200-126841123-211 Q gi|254781055|r 239 SGQ-LKSILKSGKIVKTDQVILAVGRTPRT-TGIGLEKVG-VKM 279 (461) Q Consensus 239 ~~~-~~~~~~~g~~~~~D~vl~a~Gr~Pn~-~~l~L~~~g-i~~ 279 (461) T Consensus 180 sGe~~vt~kt~~~sy~a~~lvvtaG--aW~s~kL-l~~l~Gie~ 220 (401) T TIGR01377 180 SGELLVTVKTTKDSYQAKKLVVTAG--AWTSNKL-LKKLGGIEL 220 (401) T ss_pred CCCCEEEEEEECCEEECCEEEEECC--CCHHHHH-CCCCCCEEC T ss_conf 7895489997277032135789538--8612343-130142326

HHsearch alignment for GI: 254781055 and conserved domain: TIGR01377