HHsearch alignment for GI: 254781055 and conserved domain: TIGR01989
>TIGR01989 COQ6 Ubiquinone biosynthesis mono0xygenase COQ6; InterPro: IPR000689 Ubiquinone (Q) functions as an electron carrier in the respiratory chain in mitochondria. Q biosynthesis involves a series of enzymatic steps, which are catalysed by the enzymes COQ1-COQ8 in Saccharomyces cerevisiae. COQ6, or ubiquinone biosynthesis monooxygenase, is a flavin-dependent enzyme localised to the matrix side of the inner mitochondrial membrane that is required for one or more steps in Q biosynthesis , .; GO: 0004497 monooxygenase activity.
Probab=96.83 E-value=0.0016 Score=44.85 Aligned_cols=44 Identities=11% Similarity=0.185 Sum_probs=31.5
Q ss_pred EEEEEECC-CCEEEEEEEEC---CCHHHHHHHHHHHHHCCCCHHHHHC
Q ss_conf 99999789-98699999981---9988999999999986798789963
Q gi|254781055|r 388 MKIIVHAD-NHKVLGVHILG---HEASEIIQVLGVCLKAGCVKKDFDR 431 (461)
Q Consensus 388 ~kli~~~~-~~~iLG~~~vg---~~A~elI~~~~~ai~~~~t~~~l~~ 431 (461)
T Consensus 379 ~ALvGDAAH~vHPLAGQGvNlG~~Dv~~L~~~L~~a~~~G~DiGs~~~ 426 (481)
T TIGR01989 379 VALVGDAAHRVHPLAGQGVNLGFSDVESLVKALSKAVKEGADIGSVSS 426 (481)
T ss_pred CCEECCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHH
T ss_conf 626223010678733451011178999999999999860555241452