HHsearch alignment for GI: 254781055 and conserved domain: pfam03486
>pfam03486 HI0933_like HI0933-like protein.
Probab=99.18 E-value=4.8e-11 Score=100.00 Aligned_cols=133 Identities=20% Similarity=0.392 Sum_probs=77.2
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCC--------C-CEEEEEECCCCHHHHHHH----HHHHH----------
Q ss_conf 468998898679999999998899299997787--------8-614643568270889999----99999----------
Q gi|254781055|r 5 YDLVVIGAGSSGVRSARLAAQLGKKVAICEEYR--------V-GGTCVIRGCIPKKLMFYA----SQYSE---------- 61 (461)
Q Consensus 5 yDvvIIG~GpaG~~aA~~la~~g~kV~liE~~~--------~-GGtC~~~GCiPsK~l~~~----a~~~~---------- 61 (461)
T Consensus 1 yDv~VIGgGaaGl~aAi~aa~~g~~V~ilEk~~~~GkKll~tG~GRCN~TN~~~~~~~~~~~~~~~~fl~~~l~~F~~~d 80 (405)
T pfam03486 1 YDVIVIGGGAAGLMAAISAAKRGRRVLLIEKGKKLGRKILISGGGRCNVTNSVEPDNFLSRYPGNPHFLKSALSRFTPWD 80 (405)
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCCCEECCCCCHHHHHHHCCCCHHHHHHHHHHCCHHH
T ss_conf 97999996699999999998689959999589987501588268961407899979998625775799999998489999
Q ss_pred HHHHHHCCCEECCCC---CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCC--CC-CCC-CCCCCCCCCCEEEE
Q ss_conf 998410177363775---449999999999999855466886430033200122332--22-222-22222322110011
Q gi|254781055|r 62 YFEDSQGFGWSVDHK---SFDWQSLITAQNKELSRLESFYHNRLESAGVEIFASKGI--LS-SPH-SVYIANLNRTITSR 134 (461)
Q Consensus 62 ~~~~~~~~g~~~~~~---~~d~~~~~~~~~~~~~~l~~~~~~~l~~~gv~vi~g~a~--~~-~~~-~v~V~~~~~~i~a~ 134 (461)
T Consensus 81 ~~~ff~~~Gl~~~~e~~Grv-fP~s-~~A~~Vl~----~L~~~l~~~gV~i~~~~~V~~I~~~~~~~~~v~~~~~~~~a~ 154 (405)
T pfam03486 81 FIAWFEELGVPLKEEDHGRL-FPVS-DKASDIVD----ALLNELKELGVKIRTRTRVLSVEKDDDGRFRVDTGGEELEAD 154 (405)
T ss_pred HHHHHHHCCCEEEECCCCEE-ECCC-CCHHHHHH----HHHHHHHHCCCEEEECCEEEEEEECCCCEEEEEECCCEEEEC
T ss_conf 99999977990597789979-7898-98699999----999999977978995888789997599459999489589727
Q ss_pred EEEECCCCC
Q ss_conf 123227764
Q gi|254781055|r 135 YIVVSTGGS 143 (461)
Q Consensus 135 ~iiIATGs~ 143 (461)
T Consensus 155 ~vIlAtGG~ 163 (405)
T pfam03486 155 SLVLATGGL 163 (405)
T ss_pred EEEEECCCC
T ss_conf 899904886