HHsearch alignment for GI: 254781055 and conserved domain: pfam07992
>pfam07992 Pyr_redox_2 Pyridine nucleotide-disulphide oxidoreductase. This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Probab=100.00 E-value=2.9e-39 Score=307.16 Aligned_cols=267 Identities=34% Similarity=0.598 Sum_probs=200.2
Q ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHH
Q ss_conf 68998898679999999998899299997787861464356827088999999999998410177363775449999999
Q gi|254781055|r 6 DLVVIGAGSSGVRSARLAAQLGKKVAICEEYRVGGTCVIRGCIPKKLMFYASQYSEYFEDSQGFGWSVDHKSFDWQSLIT 85 (461)
Q Consensus 6 DvvIIG~GpaG~~aA~~la~~g~kV~liE~~~~GGtC~~~GCiPsK~l~~~a~~~~~~~~~~~~g~~~~~~~~d~~~~~~ 85 (461)
T Consensus 1 DVvIIGgG~AGl~aA~~l~~~g~~v~lid~~--~~~~~~~~~i~~~~~~~~~~~----------------~~~~~~~~-- 60 (277)
T pfam07992 1 DVVIIGGGPAGLAAAIYLARLGLKVALIEKE--GGTCYNRGCIPKKLLLEAAEV----------------GKLDLRPL-- 60 (277)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEECC--CCCEEEECCCCCCCCCCCCCH----------------HHHHHHHH--
T ss_conf 9999997699999999998499979999379--993575577477116454331----------------45618999--
Q ss_pred HHHHHHHHHHHHHHHHHCCCCEEECCCC-CCCCC--CCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCC----CCCC
Q ss_conf 9999998554668864300332001223-32222--222222232211001112322776402332037622----1123
Q gi|254781055|r 86 AQNKELSRLESFYHNRLESAGVEIFASK-GILSS--PHSVYIANLNRTITSRYIVVSTGGSPNRMDFKGSDL----CITS 158 (461)
Q Consensus 86 ~~~~~~~~l~~~~~~~l~~~gv~vi~g~-a~~~~--~~~v~V~~~~~~i~a~~iiIATGs~p~~p~i~g~~~----~~ts 158 (461)
T Consensus 61 --------------~~~~~~~i~~~~~~~v~~i~~~~~~v~~~-~g~~~~~d~lviAtG~~~~~~~ipG~~~~~~~~~~~ 125 (277)
T pfam07992 61 --------------EQYKDEGIEVLLGTGVTAIDKAGKKVTLD-DGKELTYDKLVIATGARPRRPPIPGVELDGVFYLTS 125 (277)
T ss_pred --------------HHHHHCCCEEEECCEEEEEECCCCEEEEC-CCCEEECCEEEECCCCCCCCCCCCCCCCCCCEECCH
T ss_conf --------------99987597999687799997899989987-893998599999879986225778744456232369
Q ss_pred CCCCCCCCCC-CCCCCCCCCCCCCHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
Q ss_conf 7851123333-443212345453011244210122100000111122222232122222222222332332200011024
Q gi|254781055|r 159 DEIFSLKSLP-QSTLIIGGGYIAVEFAGILNSLGSKTTLVTRGNSILSKFDSDIRQGLTDVMISRGMQVFHNDTIESVVS 237 (461)
Q Consensus 159 ~~~~~l~~~P-~~i~IiGgG~ig~E~A~~~~~lG~~Vtli~~~~~~l~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~ 237 (461)
T Consensus 126 ~~~~~~~~~~~~~v~VvGgG~~g~e~A~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (277)
T pfam07992 126 DDALALREKPKKRVVVVGGGYIGLELAAALAKLGAEVTVVERRDRLLARADDEIRAALLEKLEELGGVIVLLAKVEVVVE 205 (277)
T ss_pred HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEEEEEE
T ss_conf 99987561745669997998759999999997299379998657234444789999999999973989999667889883
Q ss_pred CCCC--CEEEEECCCCCCCCCCEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCC
Q ss_conf 4576--10243127532222100001522200126841123211235433445743000035587125432643
Q gi|254781055|r 238 ESGQ--LKSILKSGKIVKTDQVILAVGRTPRTTGIGLEKVGVKMDENGFIITDCYSRTNVQSIFSLGDISGHIQ 309 (461)
Q Consensus 238 ~~~~--~~~~~~~g~~~~~D~vl~a~Gr~Pn~~~l~L~~~gi~~~~~G~i~vd~~~~Ts~~~IyA~GDv~g~~~ 309 (461)
T Consensus 206 ~~~~~~~~~~~~~~~~~~~d~~~~~~g~~~~~~~--~~~~gl~~~~~G~I~vd~~~~Ts~~~VyA~GDva~g~~ 277 (277)
T pfam07992 206 VVEGVVVKVVLEDGIEADADLVAIGRGPNPNTLL--LEKAGLELDERGYIVVDEYLRTSVPGIYAAGDVAEGRP 277 (277)
T ss_pred CCEEEEEECCCCEEEEEEEEEEEEEEEECCCCCH--HHHCCCCCCCCCCEEECCCCEECCCCEEEEEECCCCCC
T ss_conf 0036898605652799708999999741589513--77779248899958679297409999999886889999