RPSBLAST alignment for GI: 254781055 and conserved domain: TIGR03143

>gnl|CDD|132187 TIGR03143, AhpF_homolog, putative alkyl hydroperoxide reductase F subunit. This family of thioredoxin reductase homologs is found adjacent to alkylhydroperoxide reductase C subunit predominantly in cases where there is only one C subunit in the genome and that genome is lacking the F subunit partner (also a thioredcxin reductase homolog) that is usually found (TIGR03140). Length = 555

 Score = 55.6 bits (134), Expect = 3e-08
 Identities = 74/335 (22%), Positives = 125/335 (37%), Gaps = 92/335 (27%)

Query: 5   YDLVVIGAGSSGVRSARLAAQLGKKVAICEEYRVGGTCV----------IRGCIPKKLMF 54
           YDL++IG G +G+ +   A +      I E+   GG             I      +LM 
Sbjct: 5   YDLIIIGGGPAGLSAGIYAGRAKLDTLIIEKDDFGGQITITSEVVNYPGILNTTGPELM- 63

Query: 55  YASQYSEYFEDSQGFGWSVDHKSFDWQSLITAQNKELSRLESFYHNRLESAGVEIFASKG 114
                 E  + +Q FG             +     E+  ++       +     I  ++G
Sbjct: 64  -----QEMRQQAQDFG-------------VKFLQAEVLDVD------FDGDIKTIKTARG 99

Query: 115 ILSSPHSVYIANLNRTITSRYIVVSTGGSPNRMDFKGSD--------LCITSD-EIFSLK 165
              +  +V IA              TG SP ++ F G +         C T D E F+  
Sbjct: 100 DYKT-LAVLIA--------------TGASPRKLGFPGEEEFTGRGVAYCATCDGEFFTGM 144

Query: 166 SLPQSTLIIGGGYIAVEFAGILNSLGSKTTLVTRGN----------------SILSKFDS 209
            +     +IGGG+ A E A  L    SK T++ R                   I  KF++
Sbjct: 145 DV----FVIGGGFAAAEEAVFLTRYASKVTVIVREPDFTCAKLIAEKVKNHPKIEVKFNT 200

Query: 210 DIRQGLTDVMISRGMQVFHNDTIESVVSESGQLKSILKSGKIVKTDQVILAVGRTPRTTG 269
           ++++   D  +      F N+        +G+  +  K+ K   T  V + VG  P +  
Sbjct: 201 ELKEATGDDGLRYA--KFVNN-------VTGE-ITEYKAPKDAGTFGVFVFVGYAPSSE- 249

Query: 270 IGLEKVGVKMDENGFIITDCYSRTNVQSIFSLGDI 304
             L K  V++D+ G+I T+    TNV  +++ GD+
Sbjct: 250 --LFKGVVELDKRGYIPTNEDMETNVPGVYAAGDL 282