HHsearch alignment for GI: 254781056 and conserved domain: COG3772
>COG3772 Phage-related lysozyme (muraminidase) [General function prediction only].
Probab=100.00 E-value=1e-40 Score=262.76 Aligned_cols=141 Identities=42% Similarity=0.763 Sum_probs=133.6
Q ss_pred CCCHHHHHHHHHHCCCCEEEECCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHH--HHHHHHHHHHHHHHHCCCCCCCCH
Q ss_conf 489999999997538422000378888770234887773206886499999999--999999999999971110135999
Q gi|254781056|r 27 PVPNALIKMLKEFEGLRLTAYRDIGGGAWTIGYGHTGSDVTEGMTITEKEAEDF--LLKDASKSLNLLLESSPALKSTSE 104 (171)
Q Consensus 27 ~~s~~~i~lik~~EG~~~~~Y~D~~~g~~TIGyG~t~~~v~~g~~iT~~~a~~l--l~~di~~~~~~~~~~~~~~~~l~~ 104 (171)
T Consensus 6 ~~s~~gi~lIk~~EG~~~~pY~d-~~GvwTIgyGhT~~~v~pg~t~t~~e~~~~~~l~~d~~~~~~~v~~~~~--~~l~~ 82 (152)
T COG3772 6 SISEIGIALIKEFEGCRLDPYRD-PAGVWTIGYGHTGKPVGPGMTLTKEECDQANALERDLAEAERAVNRYIK--VPLTQ 82 (152)
T ss_pred CCCHHHHHHHHHHHCCCCCCCCC-CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCCH
T ss_conf 14588899999975467764167-9987788628857888898422176899987788788887898887438--89875
Q ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHH-CCCCEECCHHHHHHHHHHHHHHH
Q ss_conf 9999987664136820102716889998799899999999974-08983361069999999999740
Q gi|254781056|r 105 NRLVAVADFVFNLGIGNYNKSTFKQRVDAQDWEKAAEECKKWT-KAGGKVLPGLVKRRDAEVKLLLE 170 (171)
Q Consensus 105 ~~~~ALvs~ayN~G~~~~~~s~~~~~l~~gd~~~a~~e~~~w~-~~ggk~~~GL~~RR~~E~~l~l~ 170 (171)
T Consensus 83 ~q~dalvsf~fN~G~~~~~~Stl~r~inaGd~~~a~~~~~rw~~~~g~~~l~gL~~RR~~E~aL~~~ 149 (152)
T COG3772 83 PQFDALVSFAYNIGAGNFFSSTLLRRINAGDWSGACEQLRRWIKAGGGKVLPGLVRRREAERALFLW 149 (152)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 5777888888742601232689999987688046788734622348963027899989999999862