HHsearch alignment for GI: 254781056 and conserved domain: cd00442
>cd00442 lysozyme_like lysozyme_like domain. This contains several members including Soluble Lytic Transglycosylases (SLT), Goose Egg-White Lysozymes (GEWL), Hen Egg-White Lysozymes (HEWL), chitinases, bacteriophage lambda lysozymes, endolysins, autolysins, and chitosanases. All the members are involved in the hydrolysis of beta-1,4- linked polysaccharides.
Probab=95.89 E-value=0.0054 Score=38.04 Aligned_cols=90 Identities=20% Similarity=0.247 Sum_probs=59.2
Q ss_pred HHHHHHHHHCCCCEEEECCC-------CCCCCEECC-CCCCCC----CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999997538422000378-------888770234-887773----206886499999999999999999999971110
Q gi|254781056|r 31 ALIKMLKEFEGLRLTAYRDI-------GGGAWTIGY-GHTGSD----VTEGMTITEKEAEDFLLKDASKSLNLLLESSPA 98 (171)
Q Consensus 31 ~~i~lik~~EG~~~~~Y~D~-------~~g~~TIGy-G~t~~~----v~~g~~iT~~~a~~ll~~di~~~~~~~~~~~~~ 98 (171)
T Consensus 1 ai~~~l~~~Eg~~lk~~k~~g~~~~~~~~r~ygiG~~q~t~~~~~~~~~~g~~l-------------k~~~~~~~~~~~- 66 (105)
T cd00442 1 AIIDMLASSEGTDLKAYKDRGHGTLNPGERGYGIGLYQLTSRWSDAYRARGIGL-------------KLLAQLILKLFN- 66 (105)
T ss_pred CHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHH-------------HHHHHHHHHHCC-
T ss_conf 955664322366566666788763485423431258899989899998604017-------------789998787639-
Q ss_pred CCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCC
Q ss_conf 1359999999987664136820102716889998799
Q gi|254781056|r 99 LKSTSENRLVAVADFVFNLGIGNYNKSTFKQRVDAQD 135 (171)
Q Consensus 99 ~~~l~~~~~~ALvs~ayN~G~~~~~~s~~~~~l~~gd 135 (171)
T Consensus 67 -~~~~~k~~~~~~~~~~~~~~~~~~~~~~vrq~~~i~ 102 (105)
T cd00442 67 -PKVQDKQALQQIKNAGALIMSSFRSRGAVRQLILIN 102 (105)
T ss_pred -CCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHH
T ss_conf -312459999999866860243034411588988751