Query         gi|254781057|ref|YP_003065470.1| hypothetical protein CLIBASIA_04795 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 43
No_of_seqs    102 out of 399
Neff          4.1 
Searched_HMMs 33803
Date          Wed Jun  1 21:05:06 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254781057.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 >1xjt_A Lysozyme; open conform  99.6   1E-15   3E-20   96.3   3.4   40    3-42     26-65  (150)
  2 >2anv_A Lysozyme; direct metho  99.6 1.1E-15 3.2E-20   96.2   3.3   38    5-42      2-39  (146)
  3 >3eml_A Human adenosine A2A re  99.5 1.9E-15 5.5E-20   95.1   2.9   32   10-41      2-33  (82)
  4 >2rh1_A Beta-2-adrenergic rece  99.5 2.6E-15 7.7E-20   94.4   2.9   32   10-41      1-32  (81)
  5 >1xju_A Lysozyme; secreted ina  99.5 8.9E-16 2.6E-20   96.6  -1.3   37    6-42      1-37  (163)
  6 >1wth_A Protein GP5, tail-asso  99.4 3.4E-14   1E-18   89.1   1.3   39    3-41      2-40  (188)
  7 >3hde_A Lysozyme; antimicrobia  99.4 2.2E-14 6.4E-19   90.0  -0.4   39    4-42     20-58  (165)
  8 >1swy_A Lysozyme; RB+ binding   99.3 7.2E-13 2.1E-17   82.8   2.7   32   10-41      2-33  (164)
  9 >2qb0_B Telsam domain - lysozy  98.6 6.9E-09   2E-13   63.8   1.3   19   23-41      1-19  (68)
 10 >2o4w_A Lysozyme; protein fold  98.5 4.7E-08 1.4E-12   59.9   1.4   21   21-41      2-22  (171)

No 1  
>>1xjt_A Lysozyme; open conformation, hydrolase; HET: CIT; 1.75A {Enterobacteria phage P1} (A:1-118,A:160-191)
Probab=99.57  E-value=1e-15  Score=96.31  Aligned_cols=40  Identities=30%  Similarity=0.549  Sum_probs=37.7

Q ss_pred             CCHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEECCCCCC
Q ss_conf             5303439999999975285124303789970662026666
Q gi|254781057|r    3 GSSKILNALIEITKRYEGLKLTAYRDPGGTWTIGYGHSGS   42 (43)
Q Consensus         3 g~~kis~a~i~lIk~~EG~r~~aY~d~~G~wTIGyGHTg~   42 (43)
                      +.+++|+++++||+.|||++++||.|+.|+||||||||..
T Consensus        26 ~~~~~S~~~i~lIk~~EG~~~~~Y~D~~Gv~TIGyGhT~~   65 (150)
T 1xjt_A           26 GNVRTNQAGLELIGNAEGCRRDPYXCPAGVWTDGIGNTHG   65 (150)
T ss_dssp             TCCCCCHHHHHHHHHHHCCEEEEEECSSCCEEEETTBCSS
T ss_pred             CCCCCCHHHHHHHHHHHCCEEEEEECCCCCCEEEECCCCC
T ss_conf             7562389999999997488305677899996673062179


No 2  
>>2anv_A Lysozyme; direct methods, lanthinide binding sites, hydrolase; 1.04A {Enterobacteria phage P22} PDB: 2anx_A (A:)
Probab=99.57  E-value=1.1e-15  Score=96.22  Aligned_cols=38  Identities=45%  Similarity=0.577  Sum_probs=35.9

Q ss_pred             HHHHHHHHHHHHHHCCCCCCCEECCCCCEEEECCCCCC
Q ss_conf             03439999999975285124303789970662026666
Q gi|254781057|r    5 SKILNALIEITKRYEGLKLTAYRDPGGTWTIGYGHSGS   42 (43)
Q Consensus         5 ~kis~a~i~lIk~~EG~r~~aY~d~~G~wTIGyGHTg~   42 (43)
                      +++|+++++||+.|||++++||+|+.|+||||||||.+
T Consensus         2 l~~s~~~~~li~~~EG~~~~~Y~D~~G~~TiGyG~t~~   39 (146)
T 2anv_A            2 MQISSNGITRLKREEGERLKAYSDSRGIPTIGVGHTGK   39 (146)
T ss_dssp             CCCCHHHHHHHHHHHCCEEEEEECTTSCEEEETTBCSC
T ss_pred             CCCCHHHHHHHHHHCCCCCEEEECCCCCEEEEECCCCC
T ss_conf             66579999999986298405688899984771084426


No 3  
>>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} (A:223-304)
Probab=99.54  E-value=1.9e-15  Score=95.06  Aligned_cols=32  Identities=41%  Similarity=0.706  Sum_probs=30.0

Q ss_pred             HHHHHHHHHCCCCCCCEECCCCCEEEECCCCC
Q ss_conf             99999997528512430378997066202666
Q gi|254781057|r   10 ALIEITKRYEGLKLTAYRDPGGTWTIGYGHSG   41 (43)
Q Consensus        10 a~i~lIk~~EG~r~~aY~d~~G~wTIGyGHTg   41 (43)
                      .+++|||.|||||++||+|++|+||||||||.
T Consensus         2 ~~i~lik~~EG~rl~~Y~D~~G~~TIGyGht~   33 (82)
T 3eml_A            2 NIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLL   33 (82)
T ss_dssp             CHHHHHHHHTCCEEEEEECTTSCEEEETTEEE
T ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             77642012100023334566677765556666


No 4  
>>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3d4s_A* (A:238-318)
Probab=99.53  E-value=2.6e-15  Score=94.39  Aligned_cols=32  Identities=41%  Similarity=0.706  Sum_probs=30.2

Q ss_pred             HHHHHHHHHCCCCCCCEECCCCCEEEECCCCC
Q ss_conf             99999997528512430378997066202666
Q gi|254781057|r   10 ALIEITKRYEGLKLTAYRDPGGTWTIGYGHSG   41 (43)
Q Consensus        10 a~i~lIk~~EG~r~~aY~d~~G~wTIGyGHTg   41 (43)
                      .+++|||.|||||++||+|++|+||||||||.
T Consensus         1 ~gi~li~~~EG~r~~~Y~D~~G~~TIGyGht~   32 (81)
T 2rh1_A            1 NIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLL   32 (81)
T ss_dssp             SHHHHHHHHTCCEEEEEECTTSCEEEETTEEE
T ss_pred             HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             11101234544455556566666555666555


No 5  
>>1xju_A Lysozyme; secreted inactive conformation, hydrolase; 1.07A {Enterobacteria phage P1} (A:)
Probab=99.50  E-value=8.9e-16  Score=96.61  Aligned_cols=37  Identities=30%  Similarity=0.520  Sum_probs=35.5

Q ss_pred             HHHHHHHHHHHHHCCCCCCCEECCCCCEEEECCCCCC
Q ss_conf             3439999999975285124303789970662026666
Q gi|254781057|r    6 KILNALIEITKRYEGLKLTAYRDPGGTWTIGYGHSGS   42 (43)
Q Consensus         6 kis~a~i~lIk~~EG~r~~aY~d~~G~wTIGyGHTg~   42 (43)
                      |||+++++|||.|||++++||+|++|+||||||||..
T Consensus         1 ~~S~~~~~lik~~EG~~~~~Y~D~~G~~TiGyG~t~~   37 (163)
T 1xju_A            1 RTNQAGLELIGNAEGCRRDPYMCPAGVWTDGIGNTHG   37 (163)
T ss_dssp             CCCHHHHHHHCCHHHHHHCGGGSCGGGCCTTCCC--C
T ss_pred             CCCHHHHHHHHHHHCCCCEEEECCCCCCEEEECCCCC
T ss_conf             9699999999987188434577899983562287014


No 6  
>>1wth_A Protein GP5, tail-associated lysozyme; triple-stranded beta-helix, OB fold, pseudohexamer, T4 tail lysozyme, GP5-GP27; 2.80A {Enterobacteria phage T4} PDB: 2z6b_A 1k28_A 1pdl_A (A:167-354)
Probab=99.41  E-value=3.4e-14  Score=89.10  Aligned_cols=39  Identities=36%  Similarity=0.469  Sum_probs=36.7

Q ss_pred             CCHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEECCCCC
Q ss_conf             530343999999997528512430378997066202666
Q gi|254781057|r    3 GSSKILNALIEITKRYEGLKLTAYRDPGGTWTIGYGHSG   41 (43)
Q Consensus         3 g~~kis~a~i~lIk~~EG~r~~aY~d~~G~wTIGyGHTg   41 (43)
                      .++++|+++++||+.|||+++++|+|+.|+||||||||-
T Consensus         2 ~~~~~s~~~~~~i~~~EG~~~~~Y~D~~G~~TIG~G~~~   40 (188)
T 1wth_A            2 TDDNPNMSMAEMLRRDEGLRLKVYWDTEGYPTIGIGHLI   40 (188)
T ss_dssp             CCSSCSCCHHHHHHHHHCCEEEEEECTTSCEEEETTEES
T ss_pred             CCCCCCCCHHHHHCCCCCCEEEEEECCCCCCEECCCCEE
T ss_conf             777765223332022445134541025896100235361


No 7  
>>3hde_A Lysozyme; antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase, late protein; 1.95A {Enterobacteria phage P21} (A:)
Probab=99.40  E-value=2.2e-14  Score=90.00  Aligned_cols=39  Identities=28%  Similarity=0.489  Sum_probs=36.7

Q ss_pred             CHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEECCCCCC
Q ss_conf             303439999999975285124303789970662026666
Q gi|254781057|r    4 SSKILNALIEITKRYEGLKLTAYRDPGGTWTIGYGHSGS   42 (43)
Q Consensus         4 ~~kis~a~i~lIk~~EG~r~~aY~d~~G~wTIGyGHTg~   42 (43)
                      .+++|++++++|+.|||++++||.|+.|+||||||||+.
T Consensus        20 ~~~~s~~~~~~i~~~EG~~~~~Y~D~~G~~TIG~G~t~~   58 (165)
T 3hde_A           20 IASVLITGPSGNDGLEGVSYIPYKDIVGVWTVCHGHTGK   58 (165)
T ss_dssp             HHHHHHHCTTSSSSSSCCEEEEEECTTSCEEEETTBCST
T ss_pred             HHHHHHHHHCCCCCCCCCEEECCCCCCCCCEEEECCCCC
T ss_conf             999998751246676776513651899893784797787


No 8  
>>1swy_A Lysozyme; RB+ binding sites, AB initio direct methods, hydrolase; 1.06A {Enterobacteria phage T4} (A:)
Probab=99.31  E-value=7.2e-13  Score=82.77  Aligned_cols=32  Identities=41%  Similarity=0.706  Sum_probs=30.2

Q ss_pred             HHHHHHHHHCCCCCCCEECCCCCEEEECCCCC
Q ss_conf             99999997528512430378997066202666
Q gi|254781057|r   10 ALIEITKRYEGLKLTAYRDPGGTWTIGYGHSG   41 (43)
Q Consensus        10 a~i~lIk~~EG~r~~aY~d~~G~wTIGyGHTg   41 (43)
                      .+++||+.||||+++||+||.|+||||||||.
T Consensus         2 ~~~~li~~~EG~~~~~Y~D~~G~~TiGyG~t~   33 (164)
T 1swy_A            2 NIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLL   33 (164)
T ss_dssp             CHHHHHHHHHCCEEEEEECTTSCEEEETTEEC
T ss_pred             CHHHHHHHHCCCCCEEEECCCCCEEEEECCCC
T ss_conf             88999999628565567888988478779043


No 9  
>>2qb0_B Telsam domain - lysozyme chimera; helical polymer, hydrolase regulator; 2.56A {Escherichia coli} (B:94-161)
Probab=98.64  E-value=6.9e-09  Score=63.85  Aligned_cols=19  Identities=47%  Similarity=0.791  Sum_probs=17.6

Q ss_pred             CCCEECCCCCEEEECCCCC
Q ss_conf             2430378997066202666
Q gi|254781057|r   23 LTAYRDPGGTWTIGYGHSG   41 (43)
Q Consensus        23 ~~aY~d~~G~wTIGyGHTg   41 (43)
                      |++|+|++|+||||||||.
T Consensus         1 L~~Y~D~~G~~TIGYGH~~   19 (68)
T 2qb0_B            1 LKIYKDTEGYYTIGIGHLL   19 (68)
T ss_dssp             EEEEECSSSCEEEETTEEE
T ss_pred             CCEEECCCCCCEECCCCCC
T ss_conf             7134168998024558765


No 10 
>>2o4w_A Lysozyme; protein folding, protein stability, protein engineering, hydrolase; 1.90A {Enterobacteria phage T4} (A:)
Probab=98.45  E-value=4.7e-08  Score=59.90  Aligned_cols=21  Identities=48%  Similarity=0.822  Sum_probs=19.8

Q ss_pred             CCCCCEECCCCCEEEECCCCC
Q ss_conf             512430378997066202666
Q gi|254781057|r   21 LKLTAYRDPGGTWTIGYGHSG   41 (43)
Q Consensus        21 ~r~~aY~d~~G~wTIGyGHTg   41 (43)
                      +|++||+|+.|+||||||||-
T Consensus         2 ~rl~~Y~D~~G~~TIG~G~t~   22 (171)
T 2o4w_A            2 LRLKIYKDTEGYYTIGIGHLL   22 (171)
T ss_dssp             CCCBCEECTTSCEEETTTEEC
T ss_pred             CCCEEEECCCCCCEEEECCCC
T ss_conf             777776789999468789510


Done!