RPSBLAST alignment for GI: 254781060 and conserved domain: TIGR02203

>gnl|CDD|131258 TIGR02203, MsbA_lipidA, lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes. Length = 571
 Score = 75.5 bits (186), Expect = 1e-14
 Identities = 71/250 (28%), Positives = 119/250 (47%), Gaps = 21/250 (8%)

Query: 2   LEIKNLRAKIVDTDTEIIRGLNLKVEPSEVVAIMGPNGSGKSTLSYLLSGHKDYEITAGD 61
           +E +N+  +    D   +  ++L +EP E VA++G +GSGKSTL  L+   + YE  +G 
Sbjct: 331 VEFRNVTFRYPGRDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIP--RFYEPDSGQ 388

Query: 62  ILYKGESILDWSIVERASKGIFLAFQYPVEIPGIIMMQFLKIALNEQRKARNEKELL--- 118
           IL  G  + D+++     + + L  Q  V     I          +  +A  E+ L    
Sbjct: 389 ILLDGHDLADYTLASLRRQ-VALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAY 447

Query: 119 IPDFTRKVRK-ITAELGINMDMLKRPLNLGFSGGEKKIAEILQMRLLEPSLCILDETDSG 177
             DF  K+   +   +G N  +L        SGG+++   I +  L +  + ILDE  S 
Sbjct: 448 AQDFVDKLPLGLDTPIGENGVLL--------SGGQRQRLAIARALLKDAPILILDEATSA 499

Query: 178 LDIDALKIAAQGVNALRSQDRSFLIITHYQRLLNYIKPDTIHVLHNGKIIKTGDYSIALD 237
           LD ++ ++    +  L  Q R+ L+I H  RL    K D I V+ +G+I++ G ++  L 
Sbjct: 500 LDNESERLVQAALERLM-QGRTTLVIAH--RLSTIEKADRIVVMDDGRIVERGTHNELLA 556

Query: 238 LEENG-YAEL 246
              NG YA+L
Sbjct: 557 --RNGLYAQL 564