RPSBLAST alignment for GI: 254781060 and conserved domain: TIGR02203
>gnl|CDD|131258 TIGR02203, MsbA_lipidA, lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes. Length = 571
Score = 75.5 bits (186), Expect = 1e-14
Identities = 71/250 (28%), Positives = 119/250 (47%), Gaps = 21/250 (8%)
Query: 2 LEIKNLRAKIVDTDTEIIRGLNLKVEPSEVVAIMGPNGSGKSTLSYLLSGHKDYEITAGD 61
+E +N+ + D + ++L +EP E VA++G +GSGKSTL L+ + YE +G
Sbjct: 331 VEFRNVTFRYPGRDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIP--RFYEPDSGQ 388
Query: 62 ILYKGESILDWSIVERASKGIFLAFQYPVEIPGIIMMQFLKIALNEQRKARNEKELL--- 118
IL G + D+++ + + L Q V I + +A E+ L
Sbjct: 389 ILLDGHDLADYTLASLRRQ-VALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAY 447
Query: 119 IPDFTRKVRK-ITAELGINMDMLKRPLNLGFSGGEKKIAEILQMRLLEPSLCILDETDSG 177
DF K+ + +G N +L SGG+++ I + L + + ILDE S
Sbjct: 448 AQDFVDKLPLGLDTPIGENGVLL--------SGGQRQRLAIARALLKDAPILILDEATSA 499
Query: 178 LDIDALKIAAQGVNALRSQDRSFLIITHYQRLLNYIKPDTIHVLHNGKIIKTGDYSIALD 237
LD ++ ++ + L Q R+ L+I H RL K D I V+ +G+I++ G ++ L
Sbjct: 500 LDNESERLVQAALERLM-QGRTTLVIAH--RLSTIEKADRIVVMDDGRIVERGTHNELLA 556
Query: 238 LEENG-YAEL 246
NG YA+L
Sbjct: 557 --RNGLYAQL 564