RPSBLAST alignment for GI: 254781060 and conserved domain: TIGR01842
>gnl|CDD|162555 TIGR01842, type_I_sec_PrtD, type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. Length = 544
Score = 57.4 bits (139), Expect = 4e-09
Identities = 63/228 (27%), Positives = 105/228 (46%), Gaps = 48/228 (21%)
Query: 18 IIRGLNLKVEPSEVVAIMGPNGSGKSTLSYLLSGHKDYEITAGDILYKGESILDWSIVER 77
+RG++ +++ E +AI+GP+GSGKSTL+ L+ G T+G + G + W +R
Sbjct: 333 TLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPP--TSGSVRLDGADLKQW---DR 387
Query: 78 ASKGIFLAFQYPVEI---PGIIMMQFLKIALNEQRKARNEKELLIPDFTRKV--RKITA- 131
+ G + + P ++ PG + A N I F KI
Sbjct: 388 ETFGKHIGY-LPQDVELFPGTV--------------AEN-----IARFGENADPEKIIEA 427
Query: 132 -------ELGINM----DMLKRPLNLGFSGGEKKIAEILQMRLL--EPSLCILDETDSGL 178
EL + + D + P SGG+++ I R L +P L +LDE +S L
Sbjct: 428 AKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQ--RIALARALYGDPKLVVLDEPNSNL 485
Query: 179 DIDALKIAAQGVNALRSQDRSFLIITHYQRLLNYIKPDTIHVLHNGKI 226
D + + A + AL+++ + ++ITH LL + D I VL +G+I
Sbjct: 486 DEEGEQALANAIKALKARGITVVVITHRPSLLGCV--DKILVLQDGRI 531